Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
PRKDCP78527 AC068700.1-201ENST00000565862 3754 ntBASIC1.66□□□□□ -2.14
PRKDCP78527 AL136964.1-201ENST00000622038 2990 ntBASIC1.65□□□□□ -2.14
PRKDCP78527 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
PRKDCP78527 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC1.65□□□□□ -2.14
PRKDCP78527 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.65□□□□□ -2.14
PRKDCP78527 TVP23BP2-201ENST00000455082 615 ntBASIC1.65□□□□□ -2.14
PRKDCP78527 AC092991.1-201ENST00000477176 376 ntBASIC1.65□□□□□ -2.14
PRKDCP78527 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
PRKDCP78527 AC008432.1-201ENST00000615912 1320 ntBASIC1.65□□□□□ -2.15
PRKDCP78527 AC093392.2-201ENST00000450682 337 ntBASIC1.65□□□□□ -2.15
PRKDCP78527 RNU6ATAC39P-201ENST00000516309 149 ntBASIC1.65□□□□□ -2.15
PRKDCP78527 NPM1P35-201ENST00000533043 868 ntBASIC1.65□□□□□ -2.15
PRKDCP78527 OR4H12P-201ENST00000556269 907 ntBASIC1.65□□□□□ -2.15
PRKDCP78527 AC005046.1-201ENST00000608515 625 ntBASIC1.65□□□□□ -2.15
PRKDCP78527 AC091953.2-201ENST00000623979 160 ntBASIC1.65□□□□□ -2.15
PRKDCP78527 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
PRKDCP78527 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC1.65□□□□□ -2.15
PRKDCP78527 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
PRKDCP78527 AP000275.1-201ENST00000411943 390 ntBASIC1.65□□□□□ -2.15
PRKDCP78527 OR6C64P-201ENST00000419708 825 ntBASIC1.65□□□□□ -2.15
PRKDCP78527 RPL23AP76-201ENST00000441860 458 ntBASIC1.65□□□□□ -2.15
PRKDCP78527 MRPL50P4-201ENST00000446432 475 ntBASIC1.65□□□□□ -2.15
PRKDCP78527 SEPT7P3-201ENST00000455017 621 ntBASIC1.65□□□□□ -2.15
PRKDCP78527 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC1.65□□□□□ -2.15
PRKDCP78527 AL451074.6-201ENST00000608512 729 ntBASIC1.65□□□□□ -2.15
PRKDCP78527 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
PRKDCP78527 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
PRKDCP78527 RNA5SP383-201ENST00000362934 120 ntBASIC1.64□□□□□ -2.15
PRKDCP78527 RN7SKP247-201ENST00000411094 308 ntBASIC1.64□□□□□ -2.15
PRKDCP78527 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.64□□□□□ -2.15
PRKDCP78527 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.64□□□□□ -2.15
PRKDCP78527 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.64□□□□□ -2.15
PRKDCP78527 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
PRKDCP78527 AC095038.3-201ENST00000634439 195 ntBASIC1.64□□□□□ -2.15
PRKDCP78527 TTN-204ENST00000360870 18218 ntTSL 5 BASIC1.64□□□□□ -2.15
PRKDCP78527 AL162578.1-201ENST00000406202 378 ntBASIC1.64□□□□□ -2.15
PRKDCP78527 MTCO3P20-201ENST00000454926 688 ntBASIC1.64□□□□□ -2.15
PRKDCP78527 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.64□□□□□ -2.15
PRKDCP78527 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC1.64□□□□□ -2.15
PRKDCP78527 AC069234.5-201ENST00000611056 416 ntBASIC1.64□□□□□ -2.15
PRKDCP78527 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
PRKDCP78527 CREM-226ENST00000469949 721 ntTSL 3 BASIC1.64□□□□□ -2.15
PRKDCP78527 DYNLL1P6-201ENST00000503440 264 ntBASIC1.64□□□□□ -2.15
PRKDCP78527 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
PRKDCP78527 RNA5SP182-201ENST00000516064 82 ntBASIC1.64□□□□□ -2.15
PRKDCP78527 snoZ278.1-201ENST00000517059 112 ntBASIC1.64□□□□□ -2.15
PRKDCP78527 MTCYBP20-201ENST00000524239 1129 ntBASIC1.64□□□□□ -2.15
PRKDCP78527 RN7SL622P-201ENST00000585292 275 ntBASIC1.64□□□□□ -2.15
PRKDCP78527 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.64□□□□□ -2.15
PRKDCP78527 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1.64□□□□□ -2.15
PRKDCP78527 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
PRKDCP78527 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
PRKDCP78527 OR11H5P-202ENST00000641612 1325 ntBASIC1.64□□□□□ -2.15
PRKDCP78527 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
PRKDCP78527 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
PRKDCP78527 RNU4-62P-201ENST00000410125 130 ntBASIC1.64□□□□□ -2.15
PRKDCP78527 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.64□□□□□ -2.15
PRKDCP78527 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC1.64□□□□□ -2.15
PRKDCP78527 VWA8P1-201ENST00000510889 176 ntBASIC1.64□□□□□ -2.15
PRKDCP78527 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.64□□□□□ -2.15
PRKDCP78527 SUB1P3-201ENST00000564581 315 ntBASIC1.64□□□□□ -2.15
PRKDCP78527 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC1.64□□□□□ -2.15
PRKDCP78527 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC1.64□□□□□ -2.15
PRKDCP78527 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
PRKDCP78527 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.63□□□□□ -2.15
PRKDCP78527 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
PRKDCP78527 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC1.63□□□□□ -2.15
PRKDCP78527 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.63□□□□□ -2.15
PRKDCP78527 RPL23AP14-201ENST00000468281 468 ntBASIC1.63□□□□□ -2.15
PRKDCP78527 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.63□□□□□ -2.15
PRKDCP78527 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
PRKDCP78527 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.63□□□□□ -2.15
PRKDCP78527 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
PRKDCP78527 AL591516.1-201ENST00000611326 274 ntBASIC1.63□□□□□ -2.15
PRKDCP78527 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.63□□□□□ -2.15
PRKDCP78527 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC1.63□□□□□ -2.15
PRKDCP78527 AC012078.1-201ENST00000405035 1646 ntBASIC1.63□□□□□ -2.15
PRKDCP78527 AL451074.5-201ENST00000415894 435 ntBASIC1.63□□□□□ -2.15
PRKDCP78527 NDUFB4P6-201ENST00000436819 366 ntBASIC1.63□□□□□ -2.15
PRKDCP78527 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
PRKDCP78527 AC002553.2-201ENST00000453217 340 ntBASIC1.63□□□□□ -2.15
PRKDCP78527 AC007182.2-201ENST00000489251 402 ntBASIC1.63□□□□□ -2.15
PRKDCP78527 AC012182.1-201ENST00000570133 895 ntBASIC1.63□□□□□ -2.15
PRKDCP78527 MIR4303-201ENST00000581299 66 ntBASIC1.63□□□□□ -2.15
PRKDCP78527 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
PRKDCP78527 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
PRKDCP78527 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.63□□□□□ -2.15
PRKDCP78527 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC1.63□□□□□ -2.15
PRKDCP78527 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.63□□□□□ -2.15
PRKDCP78527 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.63□□□□□ -2.15
PRKDCP78527 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.63□□□□□ -2.15
PRKDCP78527 AC245517.5-201ENST00000611529 162 ntBASIC1.63□□□□□ -2.15
PRKDCP78527 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
PRKDCP78527 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC1.62□□□□□ -2.15
PRKDCP78527 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
PRKDCP78527 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
PRKDCP78527 MIR9-3-201ENST00000385084 90 ntBASIC1.62□□□□□ -2.15
PRKDCP78527 FAT1P1-201ENST00000406588 507 ntBASIC1.62□□□□□ -2.15
PRKDCP78527 HMGB3P23-201ENST00000414981 585 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms