Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC092447.7-201ENST00000422212 1621 ntBASIC3.26□□□□□ -1.89
LMO4P61968 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.26□□□□□ -1.89
LMO4P61968 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LMO4P61968 ELL2P4-201ENST00000446870 1376 ntBASIC3.25□□□□□ -1.89
LMO4P61968 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
LMO4P61968 AC007390.2-201ENST00000606229 3803 ntBASIC3.25□□□□□ -1.89
LMO4P61968 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
LMO4P61968 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LMO4P61968 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LMO4P61968 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LMO4P61968 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LMO4P61968 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
LMO4P61968 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.25□□□□□ -1.89
LMO4P61968 RNU6-1243P-201ENST00000364028 107 ntBASIC3.25□□□□□ -1.89
LMO4P61968 RNU6-660P-201ENST00000364566 109 ntBASIC3.25□□□□□ -1.89
LMO4P61968 U1.1-201ENST00000384101 164 ntBASIC3.25□□□□□ -1.89
LMO4P61968 RNY3P10-201ENST00000384764 102 ntBASIC3.25□□□□□ -1.89
LMO4P61968 MIR217-201ENST00000384817 110 ntBASIC3.25□□□□□ -1.89
LMO4P61968 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LMO4P61968 SNORA3C-201ENST00000408792 125 ntBASIC3.25□□□□□ -1.89
LMO4P61968 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.25□□□□□ -1.89
LMO4P61968 RNU2-42P-201ENST00000410697 113 ntBASIC3.25□□□□□ -1.89
LMO4P61968 AC069218.2-201ENST00000411665 344 ntBASIC3.25□□□□□ -1.89
LMO4P61968 MTND1P21-201ENST00000412991 285 ntBASIC3.25□□□□□ -1.89
LMO4P61968 RPL7AP73-201ENST00000413490 353 ntBASIC3.25□□□□□ -1.89
LMO4P61968 RPL23AP39-201ENST00000415533 405 ntBASIC3.25□□□□□ -1.89
LMO4P61968 CYCSP10-201ENST00000417973 294 ntBASIC3.25□□□□□ -1.89
LMO4P61968 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.25□□□□□ -1.89
LMO4P61968 AC233981.1-201ENST00000423224 461 ntBASIC3.25□□□□□ -1.89
LMO4P61968 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.25□□□□□ -1.89
LMO4P61968 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.25□□□□□ -1.89
LMO4P61968 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.25□□□□□ -1.89
LMO4P61968 AL139415.2-201ENST00000431968 163 ntBASIC3.25□□□□□ -1.89
LMO4P61968 LARP1BP3-201ENST00000437229 869 ntBASIC3.25□□□□□ -1.89
LMO4P61968 HLA-N-201ENST00000437516 135 ntBASIC3.25□□□□□ -1.89
LMO4P61968 PPIAP17-201ENST00000438507 471 ntBASIC3.25□□□□□ -1.89
LMO4P61968 AC083863.1-201ENST00000438811 231 ntBASIC3.25□□□□□ -1.89
LMO4P61968 RPL7P59-201ENST00000447700 943 ntBASIC3.25□□□□□ -1.89
LMO4P61968 RPL29P29-201ENST00000448725 423 ntBASIC3.25□□□□□ -1.89
LMO4P61968 EPS15P1-201ENST00000448836 336 ntBASIC3.25□□□□□ -1.89
LMO4P61968 AC104306.1-201ENST00000449702 371 ntBASIC3.25□□□□□ -1.89
LMO4P61968 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.25□□□□□ -1.89
LMO4P61968 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.25□□□□□ -1.89
LMO4P61968 NANOGP10-201ENST00000453325 895 ntBASIC3.25□□□□□ -1.89
LMO4P61968 SNORD108-201ENST00000459332 71 ntBASIC3.25□□□□□ -1.89
LMO4P61968 RPS26P28-201ENST00000470806 348 ntBASIC3.25□□□□□ -1.89
LMO4P61968 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.25□□□□□ -1.89
LMO4P61968 AP000893.1-201ENST00000474462 794 ntBASIC3.25□□□□□ -1.89
LMO4P61968 ACTR3P3-201ENST00000480448 893 ntBASIC3.25□□□□□ -1.89
LMO4P61968 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.25□□□□□ -1.89
LMO4P61968 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.25□□□□□ -1.89
LMO4P61968 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.25□□□□□ -1.89
LMO4P61968 PPBPP1-201ENST00000510807 373 ntBASIC3.25□□□□□ -1.89
LMO4P61968 PTGES3P3-201ENST00000511479 482 ntBASIC3.25□□□□□ -1.89
LMO4P61968 AC008549.1-201ENST00000512900 643 ntBASIC3.25□□□□□ -1.89
LMO4P61968 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.25□□□□□ -1.89
LMO4P61968 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.25□□□□□ -1.89
LMO4P61968 AC087369.1-201ENST00000520775 996 ntBASIC3.25□□□□□ -1.89
LMO4P61968 OR8L1P-201ENST00000534005 955 ntBASIC3.25□□□□□ -1.89
LMO4P61968 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.25□□□□□ -1.89
LMO4P61968 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.25□□□□□ -1.89
LMO4P61968 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.25□□□□□ -1.89
LMO4P61968 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.25□□□□□ -1.89
LMO4P61968 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.25□□□□□ -1.89
LMO4P61968 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.25□□□□□ -1.89
LMO4P61968 GTF2IP8-201ENST00000560687 584 ntBASIC3.25□□□□□ -1.89
LMO4P61968 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.25□□□□□ -1.89
LMO4P61968 AC068135.2-201ENST00000569293 1028 ntBASIC3.25□□□□□ -1.89
LMO4P61968 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.25□□□□□ -1.89
LMO4P61968 AC087499.8-201ENST00000578406 226 ntBASIC3.25□□□□□ -1.89
LMO4P61968 AC068276.1-201ENST00000605793 379 ntBASIC3.25□□□□□ -1.89
LMO4P61968 AL031666.3-201ENST00000609320 1006 ntBASIC3.25□□□□□ -1.89
LMO4P61968 AC012360.2-201ENST00000609349 391 ntBASIC3.25□□□□□ -1.89
LMO4P61968 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.25□□□□□ -1.89
LMO4P61968 MIR7154-201ENST00000620673 73 ntBASIC3.25□□□□□ -1.89
LMO4P61968 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
LMO4P61968 AC073348.1-201ENST00000623002 331 ntBASIC3.25□□□□□ -1.89
LMO4P61968 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LMO4P61968 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.25□□□□□ -1.89
LMO4P61968 AC025048.6-202ENST00000627667 438 ntBASIC3.25□□□□□ -1.89
LMO4P61968 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LMO4P61968 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
LMO4P61968 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LMO4P61968 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LMO4P61968 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.25□□□□□ -1.89
LMO4P61968 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LMO4P61968 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LMO4P61968 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.25□□□□□ -1.89
LMO4P61968 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.24□□□□□ -1.89
LMO4P61968 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
LMO4P61968 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
LMO4P61968 AP004289.2-201ENST00000444413 1457 ntBASIC3.24□□□□□ -1.89
LMO4P61968 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LMO4P61968 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LMO4P61968 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.24□□□□□ -1.89
LMO4P61968 RNU5E-4P-201ENST00000364931 120 ntBASIC3.24□□□□□ -1.89
LMO4P61968 SNORA73.2-201ENST00000364946 201 ntBASIC3.24□□□□□ -1.89
LMO4P61968 RNU6-619P-201ENST00000365146 108 ntBASIC3.24□□□□□ -1.89
LMO4P61968 RNY3P14-201ENST00000384309 102 ntBASIC3.24□□□□□ -1.89
LMO4P61968 U8.11-201ENST00000384699 133 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms