Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.06□□□□□ -2.08
CKS1BP61024 AC090136.1-201ENST00000520009 240 ntBASIC2.06□□□□□ -2.08
CKS1BP61024 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.06□□□□□ -2.08
CKS1BP61024 CR383656.14-201ENST00000551951 406 ntBASIC2.06□□□□□ -2.08
CKS1BP61024 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.06□□□□□ -2.08
CKS1BP61024 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CKS1BP61024 AMZ2P1-203ENST00000565833 850 ntBASIC2.06□□□□□ -2.08
CKS1BP61024 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.06□□□□□ -2.08
CKS1BP61024 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.06□□□□□ -2.08
CKS1BP61024 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.06□□□□□ -2.08
CKS1BP61024 NRBF2P5-201ENST00000603087 788 ntBASIC2.06□□□□□ -2.08
CKS1BP61024 AC128687.1-201ENST00000605304 619 ntBASIC2.06□□□□□ -2.08
CKS1BP61024 AC135803.1-201ENST00000608748 565 ntBASIC2.06□□□□□ -2.08
CKS1BP61024 MIR6748-201ENST00000610433 71 ntBASIC2.06□□□□□ -2.08
CKS1BP61024 AC245884.12-201ENST00000615364 59 ntBASIC2.06□□□□□ -2.08
CKS1BP61024 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CKS1BP61024 AC068724.3-201ENST00000625906 87 ntBASIC2.06□□□□□ -2.08
CKS1BP61024 MIR203B-201ENST00000636080 86 ntBASIC2.06□□□□□ -2.08
CKS1BP61024 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CKS1BP61024 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
CKS1BP61024 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CKS1BP61024 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CKS1BP61024 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.05□□□□□ -2.08
CKS1BP61024 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
CKS1BP61024 MIR6073-201ENST00000352083 89 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 RNA5SP258-201ENST00000362750 119 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 AC073264.1-201ENST00000411508 416 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 AL513331.1-201ENST00000411908 397 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.05□□□□□ -2.08
CKS1BP61024 AL451074.5-201ENST00000415894 435 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.05□□□□□ -2.08
CKS1BP61024 MORF4L1P6-201ENST00000418771 268 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 TMEM167AP1-201ENST00000423409 219 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 AC005019.1-201ENST00000436455 431 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 AC006028.1-201ENST00000438379 402 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 ARL5AP3-201ENST00000439327 386 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.05□□□□□ -2.08
CKS1BP61024 SNRPGP6-201ENST00000451124 220 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 NUTF2P7-201ENST00000453086 375 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.05□□□□□ -2.08
CKS1BP61024 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.05□□□□□ -2.08
CKS1BP61024 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.05□□□□□ -2.08
CKS1BP61024 RNF138P1-201ENST00000502765 546 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.05□□□□□ -2.08
CKS1BP61024 HMGN1P15-201ENST00000513870 295 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.05□□□□□ -2.08
CKS1BP61024 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.05□□□□□ -2.08
CKS1BP61024 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.05□□□□□ -2.08
CKS1BP61024 PRELID2P1-201ENST00000552837 301 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 AC009127.3-201ENST00000570531 403 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.05□□□□□ -2.08
CKS1BP61024 AC090666.1-201ENST00000578241 445 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 MIR5694-201ENST00000581190 76 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 RPS15AP11-201ENST00000594193 385 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 AL035413.2-201ENST00000604801 525 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CKS1BP61024 AL136295.6-201ENST00000610486 658 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 AC105227.2-201ENST00000615075 605 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.05□□□□□ -2.08
CKS1BP61024 AC016717.3-201ENST00000624730 554 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 CU459211.1-201ENST00000635667 749 ntBASIC2.05□□□□□ -2.08
CKS1BP61024 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CKS1BP61024 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CKS1BP61024 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CKS1BP61024 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CKS1BP61024 RNU5D-1-201ENST00000363299 116 ntBASIC2.04□□□□□ -2.08
CKS1BP61024 SNORA57.1-201ENST00000391227 145 ntBASIC2.04□□□□□ -2.08
CKS1BP61024 RNU6-193P-201ENST00000410977 107 ntBASIC2.04□□□□□ -2.08
CKS1BP61024 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.04□□□□□ -2.08
CKS1BP61024 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.04□□□□□ -2.08
CKS1BP61024 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.04□□□□□ -2.08
CKS1BP61024 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.04□□□□□ -2.08
CKS1BP61024 AC006548.1-201ENST00000427470 102 ntBASIC2.04□□□□□ -2.08
CKS1BP61024 OR4K11P-201ENST00000431829 904 ntBASIC2.04□□□□□ -2.08
CKS1BP61024 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.04□□□□□ -2.08
CKS1BP61024 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.04□□□□□ -2.08
CKS1BP61024 AC104687.1-201ENST00000485829 412 ntBASIC2.04□□□□□ -2.08
CKS1BP61024 SNORD116-30-201ENST00000516468 85 ntBASIC2.04□□□□□ -2.08
CKS1BP61024 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
CKS1BP61024 HIGD1AP5-201ENST00000529959 259 ntBASIC2.04□□□□□ -2.08
CKS1BP61024 SNRPGP16-201ENST00000533275 226 ntBASIC2.04□□□□□ -2.08
CKS1BP61024 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
CKS1BP61024 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.04□□□□□ -2.08
CKS1BP61024 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.04□□□□□ -2.08
CKS1BP61024 MIR3160-1-201ENST00000577972 85 ntBASIC2.04□□□□□ -2.08
CKS1BP61024 MIR2682-201ENST00000580305 110 ntBASIC2.04□□□□□ -2.08
CKS1BP61024 MIR4658-201ENST00000584344 65 ntBASIC2.04□□□□□ -2.08
CKS1BP61024 OR1M4P-201ENST00000589199 287 ntBASIC2.04□□□□□ -2.08
CKS1BP61024 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.04□□□□□ -2.08
CKS1BP61024 AC060766.3-201ENST00000591442 263 ntBASIC2.04□□□□□ -2.08
CKS1BP61024 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.04□□□□□ -2.08
CKS1BP61024 NTAN1P1-201ENST00000603150 646 ntBASIC2.04□□□□□ -2.08
CKS1BP61024 PRELID3BP8-201ENST00000604148 295 ntBASIC2.04□□□□□ -2.08
CKS1BP61024 AP001330.4-201ENST00000604350 154 ntBASIC2.04□□□□□ -2.08
CKS1BP61024 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.04□□□□□ -2.08
CKS1BP61024 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.04□□□□□ -2.08
CKS1BP61024 AC106028.5-201ENST00000610332 395 ntBASIC2.04□□□□□ -2.08
CKS1BP61024 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.04□□□□□ -2.08
CKS1BP61024 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.04□□□□□ -2.08
CKS1BP61024 Z99129.2-201ENST00000619967 314 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms