Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.57□□□□□ -1.84
PEX3P56589 AC020699.1-201ENST00000505161 445 ntBASIC3.57□□□□□ -1.84
PEX3P56589 AC114322.1-201ENST00000506771 926 ntBASIC3.57□□□□□ -1.84
PEX3P56589 AC016065.2-201ENST00000514530 444 ntBASIC3.57□□□□□ -1.84
PEX3P56589 AP001207.1-201ENST00000524051 481 ntBASIC3.57□□□□□ -1.84
PEX3P56589 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.57□□□□□ -1.84
PEX3P56589 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.57□□□□□ -1.84
PEX3P56589 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.57□□□□□ -1.84
PEX3P56589 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.57□□□□□ -1.84
PEX3P56589 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.57□□□□□ -1.84
PEX3P56589 MIR3912-201ENST00000577566 105 ntBASIC3.57□□□□□ -1.84
PEX3P56589 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.57□□□□□ -1.84
PEX3P56589 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.57□□□□□ -1.84
PEX3P56589 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.57□□□□□ -1.84
PEX3P56589 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.57□□□□□ -1.84
PEX3P56589 AC069545.1-201ENST00000605671 358 ntBASIC3.57□□□□□ -1.84
PEX3P56589 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.57□□□□□ -1.84
PEX3P56589 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.57□□□□□ -1.84
PEX3P56589 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.57□□□□□ -1.84
PEX3P56589 AC006963.1-201ENST00000624003 1052 ntBASIC3.57□□□□□ -1.84
PEX3P56589 AP001002.2-201ENST00000625137 386 ntBASIC3.57□□□□□ -1.84
PEX3P56589 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.57□□□□□ -1.84
PEX3P56589 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.57□□□□□ -1.84
PEX3P56589 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.57□□□□□ -1.84
PEX3P56589 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
PEX3P56589 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
PEX3P56589 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PEX3P56589 AC005183.1-201ENST00000603687 1979 ntBASIC3.56□□□□□ -1.84
PEX3P56589 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PEX3P56589 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
PEX3P56589 RNU6-1242P-201ENST00000391052 103 ntBASIC3.56□□□□□ -1.84
PEX3P56589 AL592310.1-201ENST00000414330 671 ntBASIC3.56□□□□□ -1.84
PEX3P56589 RPS3AP9-201ENST00000417027 792 ntBASIC3.56□□□□□ -1.84
PEX3P56589 AIMP1P1-201ENST00000418670 937 ntBASIC3.56□□□□□ -1.84
PEX3P56589 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.56□□□□□ -1.84
PEX3P56589 RPL36P19-201ENST00000430744 301 ntBASIC3.56□□□□□ -1.84
PEX3P56589 UBE2V1P1-201ENST00000430836 445 ntBASIC3.56□□□□□ -1.84
PEX3P56589 B3GNT2P1-201ENST00000434960 952 ntBASIC3.56□□□□□ -1.84
PEX3P56589 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.56□□□□□ -1.84
PEX3P56589 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.56□□□□□ -1.84
PEX3P56589 PTGES3P5-201ENST00000455109 434 ntBASIC3.56□□□□□ -1.84
PEX3P56589 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.56□□□□□ -1.84
PEX3P56589 MTCO3P35-201ENST00000485582 781 ntBASIC3.56□□□□□ -1.84
PEX3P56589 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.56□□□□□ -1.84
PEX3P56589 AC113347.3-201ENST00000509113 148 ntBASIC3.56□□□□□ -1.84
PEX3P56589 AC005351.1-201ENST00000511152 786 ntBASIC3.56□□□□□ -1.84
PEX3P56589 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.56□□□□□ -1.84
PEX3P56589 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.56□□□□□ -1.84
PEX3P56589 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.56□□□□□ -1.84
PEX3P56589 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.56□□□□□ -1.84
PEX3P56589 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.56□□□□□ -1.84
PEX3P56589 MTND1P24-201ENST00000552175 861 ntBASIC3.56□□□□□ -1.84
PEX3P56589 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.56□□□□□ -1.84
PEX3P56589 MIR2682-201ENST00000580305 110 ntBASIC3.56□□□□□ -1.84
PEX3P56589 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.56□□□□□ -1.84
PEX3P56589 AP003973.1-201ENST00000604639 691 ntBASIC3.56□□□□□ -1.84
PEX3P56589 AL450336.1-201ENST00000605180 586 ntBASIC3.56□□□□□ -1.84
PEX3P56589 AC024257.5-201ENST00000612739 531 ntBASIC3.56□□□□□ -1.84
PEX3P56589 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.56□□□□□ -1.84
PEX3P56589 AP001148.1-201ENST00000624124 2359 ntBASIC3.56□□□□□ -1.84
PEX3P56589 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
PEX3P56589 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PEX3P56589 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PEX3P56589 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PEX3P56589 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PEX3P56589 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.55□□□□□ -1.84
PEX3P56589 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.55□□□□□ -1.84
PEX3P56589 RNU6-251P-201ENST00000363235 104 ntBASIC3.55□□□□□ -1.84
PEX3P56589 Y_RNA.333-201ENST00000365274 102 ntBASIC3.55□□□□□ -1.84
PEX3P56589 SUGT1P1-201ENST00000379514 476 ntBASIC3.55□□□□□ -1.84
PEX3P56589 RNU6-921P-201ENST00000384361 107 ntBASIC3.55□□□□□ -1.84
PEX3P56589 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PEX3P56589 ERHP2-201ENST00000402323 299 ntBASIC3.55□□□□□ -1.84
PEX3P56589 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PEX3P56589 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.55□□□□□ -1.84
PEX3P56589 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.55□□□□□ -1.84
PEX3P56589 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.55□□□□□ -1.84
PEX3P56589 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.55□□□□□ -1.84
PEX3P56589 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.55□□□□□ -1.84
PEX3P56589 RPL31P54-201ENST00000429803 370 ntBASIC3.55□□□□□ -1.84
PEX3P56589 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.55□□□□□ -1.84
PEX3P56589 AC006028.1-201ENST00000438379 402 ntBASIC3.55□□□□□ -1.84
PEX3P56589 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.55□□□□□ -1.84
PEX3P56589 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.55□□□□□ -1.84
PEX3P56589 RPS26P56-201ENST00000444468 240 ntBASIC3.55□□□□□ -1.84
PEX3P56589 Z99127.3-201ENST00000448158 395 ntBASIC3.55□□□□□ -1.84
PEX3P56589 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PEX3P56589 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.55□□□□□ -1.84
PEX3P56589 VPS26AP1-201ENST00000483197 979 ntBASIC3.55□□□□□ -1.84
PEX3P56589 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.55□□□□□ -1.84
PEX3P56589 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.55□□□□□ -1.84
PEX3P56589 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PEX3P56589 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.55□□□□□ -1.84
PEX3P56589 MTCYBP16-201ENST00000509187 1129 ntBASIC3.55□□□□□ -1.84
PEX3P56589 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.55□□□□□ -1.84
PEX3P56589 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.55□□□□□ -1.84
PEX3P56589 AC022790.1-201ENST00000522872 204 ntBASIC3.55□□□□□ -1.84
PEX3P56589 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PEX3P56589 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.55□□□□□ -1.84
PEX3P56589 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms