Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.15□□□□□ -1.75
HDAC4P56524 LARP7P2-201ENST00000575306 125 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.15□□□□□ -1.75
HDAC4P56524 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.15□□□□□ -1.75
HDAC4P56524 OR2AS2P-201ENST00000606902 342 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 AL159169.3-201ENST00000608871 561 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.15□□□□□ -1.75
HDAC4P56524 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.15□□□□□ -1.75
HDAC4P56524 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.15□□□□□ -1.75
HDAC4P56524 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
HDAC4P56524 AC112484.5-201ENST00000624189 228 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.15□□□□□ -1.75
HDAC4P56524 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.15□□□□□ -1.75
HDAC4P56524 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HDAC4P56524 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.15□□□□□ -1.75
HDAC4P56524 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HDAC4P56524 ZNF734P-201ENST00000419494 1534 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.14□□□□□ -1.75
HDAC4P56524 AL079343.1-201ENST00000572358 1771 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HDAC4P56524 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
HDAC4P56524 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.14□□□□□ -1.75
HDAC4P56524 RNU6-500P-201ENST00000362349 107 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 RNA5SP167-201ENST00000365461 116 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 RNU1-89P-201ENST00000384592 164 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 MT-TC-201ENST00000387405 66 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 RPL32P23-201ENST00000397237 405 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 RNU4-6P-201ENST00000410804 122 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 MTCYBP38-201ENST00000417160 1123 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 AC016907.1-201ENST00000419483 435 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HDAC4P56524 MTND1P20-201ENST00000430341 950 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.14□□□□□ -1.75
HDAC4P56524 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.14□□□□□ -1.75
HDAC4P56524 RPL23AP35-201ENST00000451906 501 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 USP9YP10-201ENST00000454868 628 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
HDAC4P56524 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.14□□□□□ -1.75
HDAC4P56524 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.14□□□□□ -1.75
HDAC4P56524 AC026412.2-201ENST00000512270 1075 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.14□□□□□ -1.75
HDAC4P56524 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.14□□□□□ -1.75
HDAC4P56524 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.14□□□□□ -1.75
HDAC4P56524 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.14□□□□□ -1.75
HDAC4P56524 AC135279.1-201ENST00000543493 504 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 AC091516.1-201ENST00000549191 703 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.14□□□□□ -1.75
HDAC4P56524 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.14□□□□□ -1.75
HDAC4P56524 MIR4637-201ENST00000582405 84 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.14□□□□□ -1.75
HDAC4P56524 AC020914.6-201ENST00000594327 272 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 WISP1-OT1-201ENST00000602893 642 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 AC025588.3-201ENST00000604182 274 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 HMGN2P28-201ENST00000606102 262 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 AC128687.2-201ENST00000609657 566 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 AL031667.3-201ENST00000620124 655 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 AF246928.1-201ENST00000623768 87 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 AC007494.3-201ENST00000624660 743 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 AC068137.4-201ENST00000638485 296 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HDAC4P56524 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
HDAC4P56524 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.14□□□□□ -1.75
HDAC4P56524 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HDAC4P56524 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HDAC4P56524 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
HDAC4P56524 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HDAC4P56524 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
HDAC4P56524 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HDAC4P56524 AL445523.1-201ENST00000451184 1362 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 AC090337.1-201ENST00000579651 2074 ntBASIC4.14□□□□□ -1.75
HDAC4P56524 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.13□□□□□ -1.75
HDAC4P56524 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.13□□□□□ -1.75
HDAC4P56524 MIR372-201ENST00000362225 67 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 RNVU1-3-201ENST00000364313 161 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 SNORD116-9-201ENST00000384000 95 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 U1.1-201ENST00000384101 164 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 SNORD116-3-201ENST00000384287 95 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 SNORD116-7-201ENST00000384404 95 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 SNORD116-5-201ENST00000384462 95 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 Y_RNA.560-201ENST00000384689 102 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 RNA5SP171-201ENST00000391071 115 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 EIF5P1-201ENST00000400019 1231 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 SNORA11.1-201ENST00000408133 129 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 RNA5SP44-201ENST00000410446 133 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.13□□□□□ -1.75
HDAC4P56524 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.13□□□□□ -1.75
HDAC4P56524 AL691449.1-201ENST00000426570 421 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.13□□□□□ -1.75
HDAC4P56524 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.13□□□□□ -1.75
HDAC4P56524 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.13□□□□□ -1.75
HDAC4P56524 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC4P56524 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC4P56524 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC4P56524 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.13□□□□□ -1.75
HDAC4P56524 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC4P56524 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.13□□□□□ -1.75
HDAC4P56524 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.13□□□□□ -1.75
HDAC4P56524 RPL7P24-201ENST00000493052 752 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 AC114981.1-201ENST00000503897 678 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms