Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.24□□□□□ -1.73
SUMO3P55854 AC027807.1-201ENST00000559921 996 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.24□□□□□ -1.73
SUMO3P55854 AC233702.9-201ENST00000581528 203 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 RN7SL690P-201ENST00000582087 240 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
SUMO3P55854 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.24□□□□□ -1.73
SUMO3P55854 AC093838.1-201ENST00000613014 469 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 LINC00901.1-201ENST00000617252 152 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.24□□□□□ -1.73
SUMO3P55854 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.24□□□□□ -1.73
SUMO3P55854 MIR6730-201ENST00000622213 67 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 AC124864.2-201ENST00000624736 186 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
SUMO3P55854 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SUMO3P55854 MFSD8-242ENST00000641690 4199 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SUMO3P55854 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.24□□□□□ -1.73
SUMO3P55854 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SUMO3P55854 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.24□□□□□ -1.73
SUMO3P55854 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.24□□□□□ -1.73
SUMO3P55854 AC027290.2-201ENST00000623210 18662 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SUMO3P55854 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.24□□□□□ -1.73
SUMO3P55854 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SUMO3P55854 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.23□□□□□ -1.73
SUMO3P55854 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SUMO3P55854 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
SUMO3P55854 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.23□□□□□ -1.73
SUMO3P55854 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SUMO3P55854 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SUMO3P55854 AL590240.1-201ENST00000334118 313 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 RNU6-223P-201ENST00000362830 107 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 RNU6-335P-201ENST00000364563 113 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 RNU6-1103P-201ENST00000384150 107 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 RPL7P60-201ENST00000397636 735 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.23□□□□□ -1.73
SUMO3P55854 RAD23BP2-201ENST00000416003 1207 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 MTCO3P12-201ENST00000416718 547 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 RPL23AP38-201ENST00000423801 469 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.23□□□□□ -1.73
SUMO3P55854 AC133104.1-201ENST00000429100 218 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.23□□□□□ -1.73
SUMO3P55854 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.23□□□□□ -1.73
SUMO3P55854 HMGN2P21-201ENST00000447764 270 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.23□□□□□ -1.73
SUMO3P55854 PSPHP1-201ENST00000450062 261 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 C1DP4-201ENST00000455429 424 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 RNA5SP103-201ENST00000459503 118 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 AC004924.1-201ENST00000480160 781 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 RPS3AP50-201ENST00000487064 803 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SUMO3P55854 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.23□□□□□ -1.73
SUMO3P55854 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SUMO3P55854 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.23□□□□□ -1.73
SUMO3P55854 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.23□□□□□ -1.73
SUMO3P55854 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.23□□□□□ -1.73
SUMO3P55854 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.23□□□□□ -1.73
SUMO3P55854 AC087883.1-201ENST00000551882 391 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.23□□□□□ -1.73
SUMO3P55854 AL133153.1-201ENST00000557756 303 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.23□□□□□ -1.73
SUMO3P55854 AC087481.2-201ENST00000565492 330 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 AC012182.1-201ENST00000570133 895 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 AC015912.2-201ENST00000571053 181 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.23□□□□□ -1.73
SUMO3P55854 MTATP6P3-201ENST00000581686 676 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 MIR4270-201ENST00000581799 70 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 MIR4480-201ENST00000582492 71 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 MIR98-201ENST00000606724 119 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 AC007684.1-201ENST00000609671 477 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 U6atac.1-201ENST00000616025 117 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 AL158209.2-201ENST00000619266 216 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 AC022106.2-201ENST00000620114 757 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 U3.53-201ENST00000628922 216 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 OR5H6-203ENST00000642105 978 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SUMO3P55854 SCN1A-220ENST00000641603 12506 ntBASIC4.23□□□□□ -1.73
SUMO3P55854 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
SUMO3P55854 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SUMO3P55854 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SUMO3P55854 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
SUMO3P55854 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SUMO3P55854 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
SUMO3P55854 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SUMO3P55854 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SUMO3P55854 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.22□□□□□ -1.73
SUMO3P55854 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
SUMO3P55854 MAPK10-303ENST00000641324 3959 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 OR51H2P-202ENST00000641424 3046 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SUMO3P55854 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
SUMO3P55854 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SUMO3P55854 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SUMO3P55854 RNU6-432P-201ENST00000384196 109 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 SNORD3H-201ENST00000384486 214 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 MIR181A1-201ENST00000385026 110 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 VDAC1P9-201ENST00000412766 841 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 RPS15AP12-201ENST00000419498 388 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms