Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LIM2P55344 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
LIM2P55344 Z83843.1-201ENST00000604070 3685 ntBASIC3.14□□□□□ -1.91
LIM2P55344 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LIM2P55344 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LIM2P55344 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
LIM2P55344 RNU1-70P-201ENST00000362618 164 ntBASIC3.13□□□□□ -1.91
LIM2P55344 RNA5SP189-201ENST00000364920 115 ntBASIC3.13□□□□□ -1.91
LIM2P55344 MIR3074-201ENST00000384885 81 ntBASIC3.13□□□□□ -1.91
LIM2P55344 MTND4LP20-201ENST00000402379 270 ntBASIC3.13□□□□□ -1.91
LIM2P55344 RNA5SP107-201ENST00000411358 122 ntBASIC3.13□□□□□ -1.91
LIM2P55344 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.13□□□□□ -1.91
LIM2P55344 HMGN1P24-201ENST00000412282 298 ntBASIC3.13□□□□□ -1.91
LIM2P55344 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.13□□□□□ -1.91
LIM2P55344 AC012065.2-201ENST00000421295 375 ntBASIC3.13□□□□□ -1.91
LIM2P55344 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.13□□□□□ -1.91
LIM2P55344 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.13□□□□□ -1.91
LIM2P55344 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.13□□□□□ -1.91
LIM2P55344 AL138799.3-201ENST00000438968 350 ntBASIC3.13□□□□□ -1.91
LIM2P55344 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.13□□□□□ -1.91
LIM2P55344 AC093155.1-201ENST00000440164 826 ntBASIC3.13□□□□□ -1.91
LIM2P55344 ATP5C1P1-201ENST00000441945 895 ntBASIC3.13□□□□□ -1.91
LIM2P55344 MTCYBP11-201ENST00000447254 1109 ntBASIC3.13□□□□□ -1.91
LIM2P55344 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.13□□□□□ -1.91
LIM2P55344 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
LIM2P55344 RFC5P1-201ENST00000454419 874 ntBASIC3.13□□□□□ -1.91
LIM2P55344 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.13□□□□□ -1.91
LIM2P55344 PABPC1P3-201ENST00000469174 459 ntBASIC3.13□□□□□ -1.91
LIM2P55344 RPL7L1P8-201ENST00000469911 741 ntBASIC3.13□□□□□ -1.91
LIM2P55344 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.13□□□□□ -1.91
LIM2P55344 AC013828.1-201ENST00000481845 158 ntBASIC3.13□□□□□ -1.91
LIM2P55344 RPL31P13-201ENST00000484151 370 ntBASIC3.13□□□□□ -1.91
LIM2P55344 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.13□□□□□ -1.91
LIM2P55344 WBP1LP4-201ENST00000505043 344 ntBASIC3.13□□□□□ -1.91
LIM2P55344 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.13□□□□□ -1.91
LIM2P55344 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.13□□□□□ -1.91
LIM2P55344 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.13□□□□□ -1.91
LIM2P55344 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.13□□□□□ -1.91
LIM2P55344 AP004242.1-201ENST00000533701 349 ntBASIC3.13□□□□□ -1.91
LIM2P55344 AC125611.1-201ENST00000549563 229 ntBASIC3.13□□□□□ -1.91
LIM2P55344 GTF2IP8-201ENST00000560687 584 ntBASIC3.13□□□□□ -1.91
LIM2P55344 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.13□□□□□ -1.91
LIM2P55344 AC012182.1-201ENST00000570133 895 ntBASIC3.13□□□□□ -1.91
LIM2P55344 AC053481.3-201ENST00000577881 843 ntBASIC3.13□□□□□ -1.91
LIM2P55344 MIR4509-3-201ENST00000578671 94 ntBASIC3.13□□□□□ -1.91
LIM2P55344 MIR4509-2-201ENST00000583920 94 ntBASIC3.13□□□□□ -1.91
LIM2P55344 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.13□□□□□ -1.91
LIM2P55344 VN1R83P-201ENST00000595685 445 ntBASIC3.13□□□□□ -1.91
LIM2P55344 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.13□□□□□ -1.91
LIM2P55344 AC007687.1-201ENST00000602704 304 ntBASIC3.13□□□□□ -1.91
LIM2P55344 RPP40P2-201ENST00000603596 712 ntBASIC3.13□□□□□ -1.91
LIM2P55344 RPL23AP92-201ENST00000603609 255 ntBASIC3.13□□□□□ -1.91
LIM2P55344 AL162713.1-201ENST00000604480 262 ntBASIC3.13□□□□□ -1.91
LIM2P55344 AC092954.1-201ENST00000609121 445 ntBASIC3.13□□□□□ -1.91
LIM2P55344 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.13□□□□□ -1.91
LIM2P55344 uc_338.1-201ENST00000612113 180 ntBASIC3.13□□□□□ -1.91
LIM2P55344 AC231759.1-201ENST00000616455 597 ntBASIC3.13□□□□□ -1.91
LIM2P55344 MIR4509-1-201ENST00000618224 94 ntBASIC3.13□□□□□ -1.91
LIM2P55344 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.13□□□□□ -1.91
LIM2P55344 MIR7153-201ENST00000637758 57 ntBASIC3.13□□□□□ -1.91
LIM2P55344 LINC02211-204ENST00000642024 1070 ntBASIC3.13□□□□□ -1.91
LIM2P55344 AC095050.2-201ENST00000510748 1458 ntBASIC3.13□□□□□ -1.91
LIM2P55344 USP8P1-201ENST00000494673 3183 ntBASIC3.13□□□□□ -1.91
LIM2P55344 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LIM2P55344 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
LIM2P55344 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LIM2P55344 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LIM2P55344 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
LIM2P55344 AC010733.2-201ENST00000589496 5702 ntBASIC3.12□□□□□ -1.91
LIM2P55344 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.12□□□□□ -1.91
LIM2P55344 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LIM2P55344 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
LIM2P55344 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LIM2P55344 Y_RNA.25-201ENST00000362528 102 ntBASIC3.12□□□□□ -1.91
LIM2P55344 RNU6-761P-201ENST00000384148 107 ntBASIC3.12□□□□□ -1.91
LIM2P55344 AL136310.1-201ENST00000404926 654 ntBASIC3.12□□□□□ -1.91
LIM2P55344 RNU2-28P-201ENST00000410457 189 ntBASIC3.12□□□□□ -1.91
LIM2P55344 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LIM2P55344 AL449283.1-202ENST00000418249 604 ntBASIC3.12□□□□□ -1.91
LIM2P55344 MRPS36P1-201ENST00000421291 307 ntBASIC3.12□□□□□ -1.91
LIM2P55344 RPL7P44-201ENST00000424827 742 ntBASIC3.12□□□□□ -1.91
LIM2P55344 BX890604.2-201ENST00000427883 474 ntBASIC3.12□□□□□ -1.91
LIM2P55344 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.12□□□□□ -1.91
LIM2P55344 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.12□□□□□ -1.91
LIM2P55344 USP9YP31-201ENST00000431405 881 ntBASIC3.12□□□□□ -1.91
LIM2P55344 ISCA1P2-201ENST00000438679 421 ntBASIC3.12□□□□□ -1.91
LIM2P55344 HMGB3P11-201ENST00000440127 604 ntBASIC3.12□□□□□ -1.91
LIM2P55344 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.12□□□□□ -1.91
LIM2P55344 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.12□□□□□ -1.91
LIM2P55344 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.12□□□□□ -1.91
LIM2P55344 PRSS3P4-201ENST00000453323 162 ntBASIC3.12□□□□□ -1.91
LIM2P55344 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
LIM2P55344 RPS4XP10-201ENST00000465034 731 ntBASIC3.12□□□□□ -1.91
LIM2P55344 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.12□□□□□ -1.91
LIM2P55344 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.12□□□□□ -1.91
LIM2P55344 AC021678.1-201ENST00000505195 936 ntBASIC3.12□□□□□ -1.91
LIM2P55344 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.12□□□□□ -1.91
LIM2P55344 MTCO3P44-201ENST00000510977 541 ntBASIC3.12□□□□□ -1.91
LIM2P55344 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.12□□□□□ -1.91
LIM2P55344 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms