Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA2P52926 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
HMGA2P52926 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA2P52926 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA2P52926 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA2P52926 Y_RNA.117-201ENST00000363294 101 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 RNA5SP428-201ENST00000365129 132 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 AC117470.1-201ENST00000381974 330 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 Y_RNA.489-201ENST00000384410 101 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HMGA2P52926 AL590762.2-201ENST00000395798 571 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 AL591416.1-201ENST00000404015 867 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 AL359634.1-202ENST00000404721 284 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 U3.36-201ENST00000408418 213 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 RNU6-370P-201ENST00000411008 104 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGA2P52926 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGA2P52926 AC234782.4-201ENST00000417646 1048 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 AL606753.1-201ENST00000427435 87 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGA2P52926 RPS29P14-201ENST00000431518 171 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGA2P52926 LSM1P1-201ENST00000438629 273 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 HSFY6P-201ENST00000445573 403 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA2P52926 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGA2P52926 RPS20P21-201ENST00000466859 343 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 RPL21P6-201ENST00000479171 504 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 RN7SL319P-201ENST00000480656 221 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 RPS4XP1-201ENST00000482189 787 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGA2P52926 GTF2IP11-201ENST00000526931 420 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 AP000676.2-201ENST00000529711 301 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.37□□□□□ -1.71
HMGA2P52926 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGA2P52926 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.37□□□□□ -1.71
HMGA2P52926 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGA2P52926 AC008966.2-201ENST00000606157 453 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.37□□□□□ -1.71
HMGA2P52926 AL161734.1-201ENST00000609720 557 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA2P52926 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGA2P52926 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGA2P52926 U6.107-201ENST00000637108 79 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 MKKS-204ENST00000639674 192 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 AC119674.1-212ENST00000641155 993 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGA2P52926 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA2P52926 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA2P52926 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA2P52926 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGA2P52926 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA2P52926 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.37□□□□□ -1.71
HMGA2P52926 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HMGA2P52926 MTCO1P14-201ENST00000441695 1559 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
HMGA2P52926 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMGA2P52926 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGA2P52926 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
HMGA2P52926 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGA2P52926 MTND5P19-201ENST00000424872 1794 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 RNU6-1115P-201ENST00000362490 106 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 RN7SKP160-201ENST00000363804 340 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGA2P52926 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGA2P52926 Y_RNA.552-201ENST00000384665 112 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 SNORA17A-201ENST00000391185 133 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMGA2P52926 RNA5SP146-201ENST00000410743 123 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 RNU2-18P-201ENST00000411224 162 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 AP000534.2-201ENST00000412729 568 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 MTCO3P19-201ENST00000415864 321 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGA2P52926 AL158073.1-201ENST00000426848 1104 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 HMGB1P9-201ENST00000429856 646 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGA2P52926 RHOT1P3-201ENST00000436571 331 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 BNIP3P2-201ENST00000441221 577 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 H2AFZP6-201ENST00000444403 394 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 AL163193.1-201ENST00000444895 788 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 ELOCP24-201ENST00000456370 334 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 Y_RNA.635-201ENST00000459041 101 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 MIR2053-201ENST00000459295 91 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 RPL12P20-201ENST00000475538 479 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 RN7SL41P-201ENST00000476144 297 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 OR2AO1P-201ENST00000476497 403 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 AC078785.3-201ENST00000476607 425 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 AC108022.1-201ENST00000493466 478 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGA2P52926 RPL38P4-201ENST00000502376 214 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 AC091885.1-201ENST00000506658 268 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 MRPS33P2-201ENST00000507850 322 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGA2P52926 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGA2P52926 RNU6-1220P-201ENST00000517126 108 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 HMGB1P19-201ENST00000517578 577 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 AC009902.1-201ENST00000519351 183 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 AP002812.4-201ENST00000532139 286 ntBASIC4.36□□□□□ -1.71
HMGA2P52926 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGA2P52926 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms