Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MTCO1P43-201ENST00000431831 488 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 AC023347.2-201ENST00000433994 462 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 RPS12P18-201ENST00000442381 270 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 AL513328.1-201ENST00000446460 224 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 RPL37P4-201ENST00000448908 268 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 RPL7P55-201ENST00000450522 746 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 HMGN1P18-201ENST00000457642 277 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 AC104689.1-201ENST00000473356 768 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 RPL21P47-201ENST00000483696 477 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.89□□□□□ -1.95
CXCL12P48061 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.89□□□□□ -1.95
CXCL12P48061 AC078817.1-201ENST00000492623 435 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 OR5H3P-201ENST00000502817 919 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.89□□□□□ -1.95
CXCL12P48061 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.89□□□□□ -1.95
CXCL12P48061 AC006445.2-201ENST00000510061 472 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.89□□□□□ -1.95
CXCL12P48061 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.89□□□□□ -1.95
CXCL12P48061 AC093331.1-201ENST00000521474 169 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.89□□□□□ -1.95
CXCL12P48061 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.89□□□□□ -1.95
CXCL12P48061 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.89□□□□□ -1.95
CXCL12P48061 AC104763.2-201ENST00000604179 382 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 VN1R9P-201ENST00000614184 867 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 AL590808.1-201ENST00000618696 141 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CXCL12P48061 AC006213.5-201ENST00000619673 288 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 SNORA50A-202ENST00000629536 136 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 AC243829.7-201ENST00000633081 225 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CXCL12P48061 SEC63P2-201ENST00000503863 1939 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.89□□□□□ -1.95
CXCL12P48061 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CXCL12P48061 ZNF542P-204ENST00000482727 1305 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.89□□□□□ -1.95
CXCL12P48061 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CXCL12P48061 AC021755.1-201ENST00000559747 1447 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CXCL12P48061 RNU6-859P-201ENST00000362728 107 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.88□□□□□ -1.95
CXCL12P48061 MIR9-1-201ENST00000385198 89 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.88□□□□□ -1.95
CXCL12P48061 RPL32P35-201ENST00000415214 394 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.88□□□□□ -1.95
CXCL12P48061 NPM1P11-201ENST00000417106 855 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 AC127526.1-201ENST00000417526 366 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 AC008173.1-201ENST00000418901 264 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 MTCO2P1-201ENST00000424648 477 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.88□□□□□ -1.95
CXCL12P48061 RPS20P32-201ENST00000456044 356 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.88□□□□□ -1.95
CXCL12P48061 ST13P14-201ENST00000474095 734 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.88□□□□□ -1.95
CXCL12P48061 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.88□□□□□ -1.95
CXCL12P48061 AC008628.1-201ENST00000508663 265 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.88□□□□□ -1.95
CXCL12P48061 AC008413.1-201ENST00000511864 177 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 IGHV3-76-201ENST00000522465 295 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.88□□□□□ -1.95
CXCL12P48061 AL845331.3-202ENST00000562856 261 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.88□□□□□ -1.95
CXCL12P48061 AC098483.2-201ENST00000603158 454 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 AL392112.1-201ENST00000605115 829 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 AC096586.1-201ENST00000610267 561 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 TUG1_1.1-201ENST00000610654 145 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 AP003400.6-201ENST00000624698 740 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 AC132825.7-201ENST00000638744 335 ntBASIC2.88□□□□□ -1.95
CXCL12P48061 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.88□□□□□ -1.95
CXCL12P48061 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
CXCL12P48061 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CXCL12P48061 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CXCL12P48061 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CXCL12P48061 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CXCL12P48061 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.87□□□□□ -1.95
CXCL12P48061 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.87□□□□□ -1.95
CXCL12P48061 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CXCL12P48061 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CXCL12P48061 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.87□□□□□ -1.95
CXCL12P48061 U3.12-201ENST00000364498 214 ntBASIC2.87□□□□□ -1.95
CXCL12P48061 RNU6-1293P-201ENST00000384077 107 ntBASIC2.87□□□□□ -1.95
CXCL12P48061 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.87□□□□□ -1.95
CXCL12P48061 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.87□□□□□ -1.95
CXCL12P48061 MRPL50P2-201ENST00000416821 482 ntBASIC2.87□□□□□ -1.95
CXCL12P48061 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.87□□□□□ -1.95
CXCL12P48061 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.87□□□□□ -1.95
CXCL12P48061 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.87□□□□□ -1.95
CXCL12P48061 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.87□□□□□ -1.95
CXCL12P48061 UBE2V1P5-201ENST00000440070 405 ntBASIC2.87□□□□□ -1.95
CXCL12P48061 AP000936.2-201ENST00000447151 681 ntBASIC2.87□□□□□ -1.95
CXCL12P48061 RPL29P29-201ENST00000448725 423 ntBASIC2.87□□□□□ -1.95
CXCL12P48061 AL162389.1-201ENST00000449233 177 ntBASIC2.87□□□□□ -1.95
CXCL12P48061 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.87□□□□□ -1.95
CXCL12P48061 RPL37P6-202ENST00000464216 403 ntBASIC2.87□□□□□ -1.95
CXCL12P48061 UBL5P3-201ENST00000475112 231 ntBASIC2.87□□□□□ -1.95
CXCL12P48061 AP001025.2-201ENST00000490908 477 ntBASIC2.87□□□□□ -1.95
CXCL12P48061 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.87□□□□□ -1.95
CXCL12P48061 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.87□□□□□ -1.95
CXCL12P48061 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.87□□□□□ -1.95
CXCL12P48061 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.87□□□□□ -1.95
CXCL12P48061 RNA5SP217-201ENST00000515959 91 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms