Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.41□□□□□ -1.86
SSR1P43307 AC105914.1-201ENST00000511798 226 ntBASIC3.41□□□□□ -1.86
SSR1P43307 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.41□□□□□ -1.86
SSR1P43307 RNA5SP217-201ENST00000515959 91 ntBASIC3.41□□□□□ -1.86
SSR1P43307 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.41□□□□□ -1.86
SSR1P43307 ERHP1-201ENST00000523006 310 ntBASIC3.41□□□□□ -1.86
SSR1P43307 AC087373.1-201ENST00000524920 491 ntBASIC3.41□□□□□ -1.86
SSR1P43307 AC092470.1-201ENST00000546187 132 ntBASIC3.41□□□□□ -1.86
SSR1P43307 HIGD1AP1-201ENST00000550979 275 ntBASIC3.41□□□□□ -1.86
SSR1P43307 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.41□□□□□ -1.86
SSR1P43307 COX6CP3-201ENST00000580869 223 ntBASIC3.41□□□□□ -1.86
SSR1P43307 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.41□□□□□ -1.86
SSR1P43307 AC106791.2-201ENST00000604680 391 ntBASIC3.41□□□□□ -1.86
SSR1P43307 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.41□□□□□ -1.86
SSR1P43307 AL591516.1-201ENST00000611326 274 ntBASIC3.41□□□□□ -1.86
SSR1P43307 AC008083.4-201ENST00000615076 444 ntBASIC3.41□□□□□ -1.86
SSR1P43307 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SSR1P43307 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.41□□□□□ -1.86
SSR1P43307 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.41□□□□□ -1.86
SSR1P43307 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SSR1P43307 AL122126.1-201ENST00000546905 1318 ntBASIC3.41□□□□□ -1.86
SSR1P43307 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SSR1P43307 AC025263.3-201ENST00000622965 1396 ntBASIC3.4□□□□□ -1.86
SSR1P43307 RNU6-989P-201ENST00000362756 107 ntBASIC3.4□□□□□ -1.87
SSR1P43307 RNU1-85P-201ENST00000364127 164 ntBASIC3.4□□□□□ -1.87
SSR1P43307 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SSR1P43307 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSR1P43307 RNU6-444P-201ENST00000383988 108 ntBASIC3.4□□□□□ -1.87
SSR1P43307 RNU6-441P-201ENST00000384545 106 ntBASIC3.4□□□□□ -1.87
SSR1P43307 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSR1P43307 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.4□□□□□ -1.87
SSR1P43307 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.4□□□□□ -1.87
SSR1P43307 HMGN2P35-201ENST00000412164 270 ntBASIC3.4□□□□□ -1.87
SSR1P43307 USP9YP19-201ENST00000412165 485 ntBASIC3.4□□□□□ -1.87
SSR1P43307 AC069157.1-201ENST00000421749 137 ntBASIC3.4□□□□□ -1.87
SSR1P43307 HMGN2P30-201ENST00000423237 256 ntBASIC3.4□□□□□ -1.87
SSR1P43307 RPF2P1-201ENST00000424137 906 ntBASIC3.4□□□□□ -1.87
SSR1P43307 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.4□□□□□ -1.87
SSR1P43307 ARL4AP4-201ENST00000434170 518 ntBASIC3.4□□□□□ -1.87
SSR1P43307 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.4□□□□□ -1.87
SSR1P43307 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.4□□□□□ -1.87
SSR1P43307 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.4□□□□□ -1.87
SSR1P43307 PLGLA-201ENST00000465668 449 ntBASIC3.4□□□□□ -1.87
SSR1P43307 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSR1P43307 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.4□□□□□ -1.87
SSR1P43307 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSR1P43307 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.4□□□□□ -1.87
SSR1P43307 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.4□□□□□ -1.87
SSR1P43307 NBEAP1-201ENST00000554452 979 ntBASIC3.4□□□□□ -1.87
SSR1P43307 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.4□□□□□ -1.87
SSR1P43307 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.4□□□□□ -1.87
SSR1P43307 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.4□□□□□ -1.87
SSR1P43307 AL021368.1-201ENST00000607490 540 ntBASIC3.4□□□□□ -1.87
SSR1P43307 AC016542.1-201ENST00000608259 493 ntBASIC3.4□□□□□ -1.87
SSR1P43307 MIR8084-201ENST00000614105 89 ntBASIC3.4□□□□□ -1.87
SSR1P43307 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.4□□□□□ -1.87
SSR1P43307 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSR1P43307 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSR1P43307 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.4□□□□□ -1.87
SSR1P43307 AL645568.2-201ENST00000432815 1337 ntBASIC3.4□□□□□ -1.87
SSR1P43307 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SSR1P43307 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SSR1P43307 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SSR1P43307 FABP12P1-201ENST00000401911 322 ntBASIC3.39□□□□□ -1.87
SSR1P43307 MTND4P13-201ENST00000402078 1023 ntBASIC3.39□□□□□ -1.87
SSR1P43307 AL356967.1-201ENST00000406305 431 ntBASIC3.39□□□□□ -1.87
SSR1P43307 HMGN1P24-201ENST00000412282 298 ntBASIC3.39□□□□□ -1.87
SSR1P43307 AC007899.1-201ENST00000412776 775 ntBASIC3.39□□□□□ -1.87
SSR1P43307 AC008280.1-201ENST00000418851 412 ntBASIC3.39□□□□□ -1.87
SSR1P43307 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.39□□□□□ -1.87
SSR1P43307 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.39□□□□□ -1.87
SSR1P43307 AL035410.1-201ENST00000427409 427 ntBASIC3.39□□□□□ -1.87
SSR1P43307 FO393414.1-201ENST00000428697 1184 ntBASIC3.39□□□□□ -1.87
SSR1P43307 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.39□□□□□ -1.87
SSR1P43307 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.39□□□□□ -1.87
SSR1P43307 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.39□□□□□ -1.87
SSR1P43307 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.39□□□□□ -1.87
SSR1P43307 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.39□□□□□ -1.87
SSR1P43307 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.39□□□□□ -1.87
SSR1P43307 PDSS1P2-201ENST00000449397 678 ntBASIC3.39□□□□□ -1.87
SSR1P43307 snoU13.4-201ENST00000458916 104 ntBASIC3.39□□□□□ -1.87
SSR1P43307 NAP1L1P3-201ENST00000462291 880 ntBASIC3.39□□□□□ -1.87
SSR1P43307 AC091564.1-201ENST00000464563 479 ntBASIC3.39□□□□□ -1.87
SSR1P43307 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.39□□□□□ -1.87
SSR1P43307 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSR1P43307 AC004062.1-201ENST00000509926 645 ntBASIC3.39□□□□□ -1.87
SSR1P43307 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.39□□□□□ -1.87
SSR1P43307 RNU6-488P-201ENST00000515918 99 ntBASIC3.39□□□□□ -1.87
SSR1P43307 AP001207.2-201ENST00000519490 539 ntBASIC3.39□□□□□ -1.87
SSR1P43307 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.39□□□□□ -1.87
SSR1P43307 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.39□□□□□ -1.87
SSR1P43307 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.39□□□□□ -1.87
SSR1P43307 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.39□□□□□ -1.87
SSR1P43307 AC020895.1-201ENST00000595362 272 ntBASIC3.39□□□□□ -1.87
SSR1P43307 AC245036.5-201ENST00000596330 847 ntBASIC3.39□□□□□ -1.87
SSR1P43307 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.39□□□□□ -1.87
SSR1P43307 AL354976.1-201ENST00000613843 387 ntBASIC3.39□□□□□ -1.87
SSR1P43307 AL512506.1-201ENST00000613918 449 ntBASIC3.39□□□□□ -1.87
SSR1P43307 AC098679.5-201ENST00000624394 571 ntBASIC3.39□□□□□ -1.87
SSR1P43307 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms