Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC1A1P43005 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SLC1A1P43005 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SLC1A1P43005 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SLC1A1P43005 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SLC1A1P43005 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SLC1A1P43005 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 RNU6-339P-201ENST00000384310 107 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 RNU6-921P-201ENST00000384361 107 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SLC1A1P43005 SNORD65C-201ENST00000390962 71 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 SNORA26.7-201ENST00000391288 122 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 AL451074.5-201ENST00000415894 435 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 AL606495.1-201ENST00000422100 813 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC1A1P43005 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC1A1P43005 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC1A1P43005 AL591503.2-201ENST00000442314 1005 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 HSFY3P-201ENST00000444242 1191 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 AL096803.2-201ENST00000450032 677 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 HMGN3P1-201ENST00000453847 193 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.11□□□□□ -1.91
SLC1A1P43005 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC1A1P43005 AC010285.1-201ENST00000470580 392 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 RN7SL807P-201ENST00000470923 297 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 AC117440.1-201ENST00000474107 571 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.11□□□□□ -1.91
SLC1A1P43005 RN7SKP272-201ENST00000516988 232 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.11□□□□□ -1.91
SLC1A1P43005 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC1A1P43005 AC079148.1-201ENST00000565944 819 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 MIR1254-2-201ENST00000579553 63 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 RN7SL622P-201ENST00000585292 275 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 AL513477.2-201ENST00000607858 568 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 AL118556.2-201ENST00000614375 824 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 AC010338.1-201ENST00000621823 717 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.11□□□□□ -1.91
SLC1A1P43005 AC097460.3-201ENST00000623099 442 ntBASIC3.11□□□□□ -1.91
SLC1A1P43005 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.11□□□□□ -1.91
SLC1A1P43005 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.11□□□□□ -1.91
SLC1A1P43005 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
SLC1A1P43005 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC1A1P43005 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
SLC1A1P43005 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SLC1A1P43005 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SLC1A1P43005 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SLC1A1P43005 RNA5SP72-201ENST00000364442 117 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 SNORA54-201ENST00000384281 123 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 MIR7-3-201ENST00000384898 110 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SLC1A1P43005 U3.42-201ENST00000408746 214 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 RPL7P8-201ENST00000411964 730 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 AC233981.1-201ENST00000423224 461 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC1A1P43005 MTND4P15-201ENST00000437913 1033 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 HIGD1AP11-201ENST00000438361 280 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 RPL21P2-201ENST00000440049 481 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC1A1P43005 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC1A1P43005 NPM1P13-201ENST00000452663 865 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 RPS24P6-201ENST00000452670 400 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 GTF2IP12-201ENST00000456547 356 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 snoU13.24-201ENST00000458998 104 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 RPL21P104-201ENST00000464143 478 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC1A1P43005 AC068724.1-201ENST00000487100 792 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 OR5H5P-201ENST00000503164 928 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC1A1P43005 HSPD1P15-201ENST00000505573 1122 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 PRELID3BP4-201ENST00000515476 571 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 SNORA31.20-201ENST00000517111 133 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC1A1P43005 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC1A1P43005 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.1□□□□□ -1.91
SLC1A1P43005 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
SLC1A1P43005 AC107016.2-201ENST00000547968 190 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SLC1A1P43005 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC1A1P43005 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC1A1P43005 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC1A1P43005 AC074051.3-201ENST00000570238 358 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC1A1P43005 MIR4474-201ENST00000579189 78 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 BPTFP1-201ENST00000579209 492 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC1A1P43005 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC1A1P43005 AC083760.1-201ENST00000589621 670 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC1A1P43005 AC090115.4-201ENST00000609970 188 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 AC090116.1-201ENST00000615679 446 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC1A1P43005 AC006963.1-201ENST00000624003 1052 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 LRRC77P-213ENST00000637727 880 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC1A1P43005 MTND4P34-201ENST00000572715 1371 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC1A1P43005 AC108206.1-201ENST00000570186 4159 ntBASIC3.1□□□□□ -1.91
SLC1A1P43005 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms