Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDE6BP35913 BX890604.2-201ENST00000427883 474 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.62□□□□□ -1.51
PDE6BP35913 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDE6BP35913 RPL23AP43-201ENST00000446445 471 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.62□□□□□ -1.51
PDE6BP35913 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.62□□□□□ -1.51
PDE6BP35913 HMGB3P21-201ENST00000452483 547 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.62□□□□□ -1.51
PDE6BP35913 DHFRP3-201ENST00000455595 559 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.62□□□□□ -1.51
PDE6BP35913 AC022447.3-201ENST00000506865 495 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.62□□□□□ -1.51
PDE6BP35913 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.62□□□□□ -1.51
PDE6BP35913 Y_RNA.693-201ENST00000516641 110 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.62□□□□□ -1.51
PDE6BP35913 AC005868.1-201ENST00000536421 331 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 AC025678.1-201ENST00000567861 338 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 AC012182.1-201ENST00000570133 895 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.62□□□□□ -1.51
PDE6BP35913 HNRNPCP4-201ENST00000571636 900 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.62□□□□□ -1.51
PDE6BP35913 AC009977.1-201ENST00000586015 570 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.62□□□□□ -1.51
PDE6BP35913 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.62□□□□□ -1.51
PDE6BP35913 AC115621.1-201ENST00000604653 858 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 AL360085.1-201ENST00000604713 532 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 AC007363.1-201ENST00000604736 620 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 AL365204.3-201ENST00000612448 685 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 AC005332.6-201ENST00000613178 446 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 AC108479.2-201ENST00000617314 601 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 uc_338.13-201ENST00000618243 179 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.62□□□□□ -1.51
PDE6BP35913 AC093591.3-201ENST00000634516 308 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 MTND5P42-201ENST00000637720 498 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 OR4G11P-202ENST00000642116 1414 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDE6BP35913 CCT4P2-201ENST00000233836 1548 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 AL391684.1-202ENST00000641293 1636 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDE6BP35913 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDE6BP35913 AC025125.1-201ENST00000624743 1922 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 Z95331.1-201ENST00000623075 23112 ntBASIC5.62□□□□□ -1.51
PDE6BP35913 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDE6BP35913 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDE6BP35913 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDE6BP35913 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PDE6BP35913 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDE6BP35913 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDE6BP35913 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
PDE6BP35913 CTSL3P-202ENST00000412179 788 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 OR51A3P-201ENST00000413596 924 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 AL513185.2-201ENST00000425543 193 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.61□□□□□ -1.51
PDE6BP35913 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.61□□□□□ -1.51
PDE6BP35913 RPS26P40-201ENST00000435209 294 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDE6BP35913 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.61□□□□□ -1.51
PDE6BP35913 RPS27AP15-201ENST00000447672 466 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.61□□□□□ -1.51
PDE6BP35913 IFNWP4-201ENST00000453148 294 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.61□□□□□ -1.51
PDE6BP35913 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.61□□□□□ -1.51
PDE6BP35913 SNORA67.7-201ENST00000516664 135 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 ARL2BPP5-201ENST00000523141 481 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.61□□□□□ -1.51
PDE6BP35913 AC022878.1-201ENST00000530684 149 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.61□□□□□ -1.51
PDE6BP35913 AL352979.3-201ENST00000553515 247 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 TRAV15-201ENST00000556680 249 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 AC138915.2-201ENST00000569776 97 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 MIR3936-201ENST00000584304 110 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.61□□□□□ -1.51
PDE6BP35913 KC877982.1-201ENST00000602313 470 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 AC112191.3-201ENST00000604371 277 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.61□□□□□ -1.51
PDE6BP35913 AC020634.1-201ENST00000608701 549 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 AC006133.1-201ENST00000617106 264 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 MIR6864-201ENST00000617935 70 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.61□□□□□ -1.51
PDE6BP35913 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.61□□□□□ -1.51
PDE6BP35913 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDE6BP35913 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDE6BP35913 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDE6BP35913 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDE6BP35913 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PDE6BP35913 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PDE6BP35913 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.6□□□□□ -1.51
PDE6BP35913 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.6□□□□□ -1.51
PDE6BP35913 ERCC6-202ENST00000374127 1782 ntBASIC5.6□□□□□ -1.51
PDE6BP35913 AC107982.1-201ENST00000507171 1300 ntBASIC5.6□□□□□ -1.51
PDE6BP35913 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.6□□□□□ -1.51
PDE6BP35913 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDE6BP35913 SNORD56.2-201ENST00000363242 71 ntBASIC5.6□□□□□ -1.51
PDE6BP35913 RNU6-1103P-201ENST00000384150 107 ntBASIC5.6□□□□□ -1.51
PDE6BP35913 RNA5SP171-201ENST00000391071 115 ntBASIC5.6□□□□□ -1.51
PDE6BP35913 U3.35-201ENST00000408405 208 ntBASIC5.6□□□□□ -1.51
PDE6BP35913 HMGB1P11-201ENST00000413899 637 ntBASIC5.6□□□□□ -1.51
PDE6BP35913 BX295541.1-201ENST00000417774 250 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms