Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC084035.1-201ENST00000634543 607 ntBASIC4.35□□□□□ -1.71
CIITAP33076 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.35□□□□□ -1.71
CIITAP33076 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CIITAP33076 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CIITAP33076 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CIITAP33076 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CIITAP33076 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.35□□□□□ -1.71
CIITAP33076 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CIITAP33076 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CIITAP33076 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CIITAP33076 RNU6-374P-201ENST00000364146 108 ntBASIC4.34□□□□□ -1.71
CIITAP33076 RNU6-660P-201ENST00000364566 109 ntBASIC4.34□□□□□ -1.71
CIITAP33076 Y_RNA.302-201ENST00000364997 102 ntBASIC4.34□□□□□ -1.71
CIITAP33076 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CIITAP33076 SNORA11-201ENST00000408789 128 ntBASIC4.34□□□□□ -1.71
CIITAP33076 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.34□□□□□ -1.71
CIITAP33076 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CIITAP33076 MTCYBP38-201ENST00000417160 1123 ntBASIC4.34□□□□□ -1.71
CIITAP33076 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.34□□□□□ -1.71
CIITAP33076 RPL17P36-201ENST00000420302 549 ntBASIC4.34□□□□□ -1.71
CIITAP33076 CYCSP46-201ENST00000423569 204 ntBASIC4.34□□□□□ -1.71
CIITAP33076 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.34□□□□□ -1.71
CIITAP33076 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.34□□□□□ -1.71
CIITAP33076 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.34□□□□□ -1.71
CIITAP33076 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.34□□□□□ -1.71
CIITAP33076 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.34□□□□□ -1.71
CIITAP33076 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.34□□□□□ -1.71
CIITAP33076 ELOCP30-201ENST00000447108 299 ntBASIC4.34□□□□□ -1.71
CIITAP33076 BX276092.4-201ENST00000452056 248 ntBASIC4.34□□□□□ -1.71
CIITAP33076 NDUFA5P7-201ENST00000452914 242 ntBASIC4.34□□□□□ -1.71
CIITAP33076 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CIITAP33076 TRGVB-201ENST00000453257 471 ntBASIC4.34□□□□□ -1.71
CIITAP33076 MTCO3P11-201ENST00000455103 774 ntBASIC4.34□□□□□ -1.71
CIITAP33076 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.34□□□□□ -1.71
CIITAP33076 ARPC3P2-201ENST00000457786 533 ntBASIC4.34□□□□□ -1.71
CIITAP33076 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.34□□□□□ -1.71
CIITAP33076 AC087879.1-201ENST00000474343 374 ntBASIC4.34□□□□□ -1.71
CIITAP33076 AC084198.1-201ENST00000477747 402 ntBASIC4.34□□□□□ -1.71
CIITAP33076 AC108078.3-201ENST00000502633 489 ntBASIC4.34□□□□□ -1.71
CIITAP33076 AC108941.1-201ENST00000502853 530 ntBASIC4.34□□□□□ -1.71
CIITAP33076 MTCYBP17-201ENST00000503579 789 ntBASIC4.34□□□□□ -1.71
CIITAP33076 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.34□□□□□ -1.71
CIITAP33076 MTCO1P30-201ENST00000515244 580 ntBASIC4.34□□□□□ -1.71
CIITAP33076 AC093853.1-201ENST00000515689 483 ntBASIC4.34□□□□□ -1.71
CIITAP33076 RNA5SP164-201ENST00000516533 110 ntBASIC4.34□□□□□ -1.71
CIITAP33076 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.34□□□□□ -1.71
CIITAP33076 RN7SKP277-201ENST00000516895 283 ntBASIC4.34□□□□□ -1.71
CIITAP33076 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.34□□□□□ -1.71
CIITAP33076 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.34□□□□□ -1.71
CIITAP33076 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CIITAP33076 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.34□□□□□ -1.71
CIITAP33076 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.34□□□□□ -1.71
CIITAP33076 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.34□□□□□ -1.71
CIITAP33076 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.34□□□□□ -1.71
CIITAP33076 AC006362.1-201ENST00000567392 174 ntBASIC4.34□□□□□ -1.71
CIITAP33076 MIR4504-201ENST00000577413 92 ntBASIC4.34□□□□□ -1.71
CIITAP33076 AC068790.6-201ENST00000602558 258 ntBASIC4.34□□□□□ -1.71
CIITAP33076 AC007566.2-201ENST00000603642 413 ntBASIC4.34□□□□□ -1.71
CIITAP33076 MTCYBP22-201ENST00000603788 447 ntBASIC4.34□□□□□ -1.71
CIITAP33076 AC113194.1-201ENST00000606037 500 ntBASIC4.34□□□□□ -1.71
CIITAP33076 AC092354.1-201ENST00000606057 376 ntBASIC4.34□□□□□ -1.71
CIITAP33076 AP000254.1-201ENST00000609934 520 ntBASIC4.34□□□□□ -1.71
CIITAP33076 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.34□□□□□ -1.71
CIITAP33076 AC233309.1-201ENST00000619522 751 ntBASIC4.34□□□□□ -1.71
CIITAP33076 AC092650.2-201ENST00000619984 902 ntBASIC4.34□□□□□ -1.71
CIITAP33076 AC127502.3-201ENST00000636170 1206 ntBASIC4.34□□□□□ -1.71
CIITAP33076 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.34□□□□□ -1.71
CIITAP33076 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CIITAP33076 NMD3P1-201ENST00000439704 1488 ntBASIC4.34□□□□□ -1.71
CIITAP33076 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.34□□□□□ -1.71
CIITAP33076 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CIITAP33076 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CIITAP33076 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CIITAP33076 AL161912.2-201ENST00000565707 3007 ntBASIC4.34□□□□□ -1.72
CIITAP33076 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CIITAP33076 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.33□□□□□ -1.72
CIITAP33076 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CIITAP33076 Y_RNA.18-201ENST00000362461 102 ntBASIC4.33□□□□□ -1.72
CIITAP33076 Y_RNA.25-201ENST00000362528 102 ntBASIC4.33□□□□□ -1.72
CIITAP33076 Y_RNA.559-201ENST00000384686 107 ntBASIC4.33□□□□□ -1.72
CIITAP33076 MIR134-201ENST00000385258 73 ntBASIC4.33□□□□□ -1.72
CIITAP33076 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CIITAP33076 AC025750.1-201ENST00000399891 379 ntBASIC4.33□□□□□ -1.72
CIITAP33076 RN7SKP156-201ENST00000410308 342 ntBASIC4.33□□□□□ -1.72
CIITAP33076 USP9YP33-201ENST00000412220 421 ntBASIC4.33□□□□□ -1.72
CIITAP33076 RPL31P2-201ENST00000413849 377 ntBASIC4.33□□□□□ -1.72
CIITAP33076 MTCO3P41-201ENST00000414801 328 ntBASIC4.33□□□□□ -1.72
CIITAP33076 RPL23AP39-201ENST00000415533 405 ntBASIC4.33□□□□□ -1.72
CIITAP33076 RPS3AP9-201ENST00000417027 792 ntBASIC4.33□□□□□ -1.72
CIITAP33076 AL591419.1-201ENST00000427423 339 ntBASIC4.33□□□□□ -1.72
CIITAP33076 FTH1P6-201ENST00000430768 320 ntBASIC4.33□□□□□ -1.72
CIITAP33076 USP9YP35-201ENST00000435696 412 ntBASIC4.33□□□□□ -1.72
CIITAP33076 YWHAZP8-201ENST00000436935 731 ntBASIC4.33□□□□□ -1.72
CIITAP33076 AC122718.1-201ENST00000439448 744 ntBASIC4.33□□□□□ -1.72
CIITAP33076 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.33□□□□□ -1.72
CIITAP33076 EPS15P1-201ENST00000448836 336 ntBASIC4.33□□□□□ -1.72
CIITAP33076 UBDP1-202ENST00000457888 382 ntBASIC4.33□□□□□ -1.72
CIITAP33076 SNORD108-201ENST00000459332 71 ntBASIC4.33□□□□□ -1.72
CIITAP33076 AL133162.1-201ENST00000463228 453 ntBASIC4.33□□□□□ -1.72
CIITAP33076 FAM133DP-201ENST00000464802 691 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms