Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ABCD3P28288 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ABCD3P28288 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ABCD3P28288 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ABCD3P28288 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.93□□□□□ -1.78
ABCD3P28288 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.93□□□□□ -1.78
ABCD3P28288 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
ABCD3P28288 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.93□□□□□ -1.78
ABCD3P28288 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ABCD3P28288 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
ABCD3P28288 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.92□□□□□ -1.78
ABCD3P28288 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ABCD3P28288 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ABCD3P28288 RNU1-15P-201ENST00000353977 144 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 MIR383-201ENST00000362257 73 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 MIR135A2-201ENST00000384854 100 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 RNU6-882P-201ENST00000391025 103 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 HSPE1P26-201ENST00000405341 275 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 RNU2-43P-201ENST00000410306 190 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.92□□□□□ -1.78
ABCD3P28288 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.92□□□□□ -1.78
ABCD3P28288 BX119904.4-201ENST00000424402 301 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 AL390023.1-201ENST00000428836 262 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.92□□□□□ -1.78
ABCD3P28288 AC004866.2-201ENST00000438285 481 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 AL512286.1-201ENST00000439244 400 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 TPT1P12-201ENST00000448968 492 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ABCD3P28288 RPL5P32-201ENST00000454085 879 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 AP1S2P1-201ENST00000457344 379 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 SETP11-201ENST00000473027 690 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 TMED11P-201ENST00000479478 690 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.92□□□□□ -1.78
ABCD3P28288 BNIP3P41-201ENST00000503774 571 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.92□□□□□ -1.78
ABCD3P28288 PPBPP1-201ENST00000510807 373 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 AC022483.1-201ENST00000514020 567 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ABCD3P28288 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ABCD3P28288 AC034268.2-201ENST00000571784 482 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.92□□□□□ -1.78
ABCD3P28288 MIR3915-201ENST00000578518 97 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.92□□□□□ -1.78
ABCD3P28288 WISP1-OT1-201ENST00000602893 642 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 ARF4P1-201ENST00000605447 541 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 AC092354.1-201ENST00000606057 376 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.92□□□□□ -1.78
ABCD3P28288 AC091931.1-201ENST00000623488 728 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 MIR6830-201ENST00000636015 70 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.92□□□□□ -1.78
ABCD3P28288 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.92□□□□□ -1.78
ABCD3P28288 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ABCD3P28288 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ABCD3P28288 AC009902.3-201ENST00000606235 2172 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 AC016588.2-201ENST00000632484 3021 ntBASIC3.92□□□□□ -1.78
ABCD3P28288 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.91□□□□□ -1.78
ABCD3P28288 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
ABCD3P28288 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ABCD3P28288 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
ABCD3P28288 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
ABCD3P28288 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ABCD3P28288 SNORD74.4-201ENST00000364129 80 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 RNU6-1078P-201ENST00000364522 103 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.91□□□□□ -1.78
ABCD3P28288 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
ABCD3P28288 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.91□□□□□ -1.78
ABCD3P28288 U8.14-201ENST00000390843 143 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 AC090960.1-201ENST00000421072 306 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.91□□□□□ -1.78
ABCD3P28288 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.91□□□□□ -1.78
ABCD3P28288 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.91□□□□□ -1.78
ABCD3P28288 OR8F1P-201ENST00000425243 930 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 MTCO1P39-201ENST00000426148 480 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 AL445669.1-201ENST00000426743 755 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 RPL37P21-201ENST00000435890 276 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.91□□□□□ -1.78
ABCD3P28288 FAM103A2P-201ENST00000444122 354 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.91□□□□□ -1.78
ABCD3P28288 AC010618.1-201ENST00000469924 477 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 AC105137.1-201ENST00000484355 562 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.91□□□□□ -1.78
ABCD3P28288 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.91□□□□□ -1.78
ABCD3P28288 AC108043.1-201ENST00000512696 574 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ABCD3P28288 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.91□□□□□ -1.78
ABCD3P28288 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.91□□□□□ -1.78
ABCD3P28288 IGLV3-26-201ENST00000520756 302 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.91□□□□□ -1.78
ABCD3P28288 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.91□□□□□ -1.78
ABCD3P28288 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.91□□□□□ -1.78
ABCD3P28288 AC012321.1-201ENST00000561622 1588 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 FAM60BP-201ENST00000578364 658 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 OR4K8P-201ENST00000578842 1048 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 MIR3939-201ENST00000582614 106 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 MIR4307-201ENST00000582802 84 ntBASIC3.91□□□□□ -1.78
ABCD3P28288 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.91□□□□□ -1.78
ABCD3P28288 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms