Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.64□□□□□ -1.51
NFKB1P19838 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.64□□□□□ -1.51
NFKB1P19838 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.64□□□□□ -1.51
NFKB1P19838 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.64□□□□□ -1.51
NFKB1P19838 AC092013.1-201ENST00000438795 332 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.64□□□□□ -1.51
NFKB1P19838 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.64□□□□□ -1.51
NFKB1P19838 RPL21P8-201ENST00000465083 535 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 RN7SL188P-201ENST00000469842 285 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 AC006511.1-201ENST00000470614 315 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 AC103987.1-201ENST00000473394 348 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 HMGB1P21-201ENST00000502313 581 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.64□□□□□ -1.51
NFKB1P19838 Y_RNA.670-201ENST00000516255 105 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 AC022882.1-201ENST00000532142 501 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.64□□□□□ -1.51
NFKB1P19838 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.64□□□□□ -1.51
NFKB1P19838 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.64□□□□□ -1.51
NFKB1P19838 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
NFKB1P19838 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.64□□□□□ -1.51
NFKB1P19838 AC005341.1-201ENST00000571086 708 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.64□□□□□ -1.51
NFKB1P19838 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.64□□□□□ -1.51
NFKB1P19838 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.64□□□□□ -1.51
NFKB1P19838 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.64□□□□□ -1.51
NFKB1P19838 AC018462.2-201ENST00000605375 395 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 AC078938.1-201ENST00000620993 318 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.64□□□□□ -1.51
NFKB1P19838 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NFKB1P19838 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NFKB1P19838 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NFKB1P19838 AC083899.1-201ENST00000454465 3819 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NFKB1P19838 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NFKB1P19838 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NFKB1P19838 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NFKB1P19838 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NFKB1P19838 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NFKB1P19838 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NFKB1P19838 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NFKB1P19838 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
NFKB1P19838 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NFKB1P19838 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.63□□□□□ -1.51
NFKB1P19838 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NFKB1P19838 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NFKB1P19838 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
NFKB1P19838 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NFKB1P19838 RNA5SP284-201ENST00000384547 118 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NFKB1P19838 Y_RNA.594-201ENST00000410373 140 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 BX682237.1-201ENST00000415016 335 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 AL356968.1-201ENST00000416622 474 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.63□□□□□ -1.51
NFKB1P19838 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.63□□□□□ -1.51
NFKB1P19838 AL133173.1-201ENST00000423458 397 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 MRPS21P2-201ENST00000424704 264 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.63□□□□□ -1.51
NFKB1P19838 NDUFB4P8-201ENST00000435351 367 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 OR6D1P-201ENST00000436165 939 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 AC073465.2-201ENST00000440938 498 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.63□□□□□ -1.51
NFKB1P19838 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.63□□□□□ -1.51
NFKB1P19838 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.63□□□□□ -1.51
NFKB1P19838 AL450023.1-201ENST00000450868 751 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 AL353691.1-201ENST00000451332 387 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 PCNPP5-201ENST00000452246 481 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.63□□□□□ -1.51
NFKB1P19838 AC116533.1-201ENST00000459748 321 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 RN7SL72P-201ENST00000460697 269 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 ABCC13-202ENST00000463099 3842 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 AC007998.1-201ENST00000474156 672 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.63□□□□□ -1.51
NFKB1P19838 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 RNY3P15-201ENST00000516297 97 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 RNU6-64P-201ENST00000517119 105 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.63□□□□□ -1.51
NFKB1P19838 AC105031.1-201ENST00000518550 476 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.63□□□□□ -1.51
NFKB1P19838 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.63□□□□□ -1.51
NFKB1P19838 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.63□□□□□ -1.51
NFKB1P19838 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NFKB1P19838 AC020910.3-201ENST00000603701 874 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 AC020634.1-201ENST00000608701 549 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 AL139124.1-201ENST00000609123 421 ntBASIC5.63□□□□□ -1.51
NFKB1P19838 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NFKB1P19838 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.63□□□□□ -1.51
NFKB1P19838 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NFKB1P19838 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.63□□□□□ -1.51
NFKB1P19838 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.63□□□□□ -1.51
NFKB1P19838 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NFKB1P19838 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NFKB1P19838 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NFKB1P19838 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
NFKB1P19838 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.62□□□□□ -1.51
NFKB1P19838 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NFKB1P19838 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NFKB1P19838 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NFKB1P19838 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NFKB1P19838 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms