Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AL118496.1-201ENST00000440201 1812 ntBASIC5.76□□□□□ -1.49
LIG1P18858 SALL4P2-201ENST00000423288 2910 ntBASIC5.76□□□□□ -1.49
LIG1P18858 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
LIG1P18858 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LIG1P18858 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
LIG1P18858 RNA5SP507-201ENST00000363603 121 ntBASIC5.76□□□□□ -1.49
LIG1P18858 U8.4-201ENST00000363626 134 ntBASIC5.76□□□□□ -1.49
LIG1P18858 SNORA74A-201ENST00000364089 198 ntBASIC5.76□□□□□ -1.49
LIG1P18858 RNY1P12-201ENST00000364251 105 ntBASIC5.76□□□□□ -1.49
LIG1P18858 Y_RNA.387-201ENST00000383918 102 ntBASIC5.76□□□□□ -1.49
LIG1P18858 SNORA70-201ENST00000384436 135 ntBASIC5.76□□□□□ -1.49
LIG1P18858 ARF4P3-201ENST00000397387 509 ntBASIC5.76□□□□□ -1.49
LIG1P18858 EIF5P1-201ENST00000400019 1231 ntBASIC5.76□□□□□ -1.49
LIG1P18858 MIR1182-201ENST00000408363 97 ntBASIC5.76□□□□□ -1.49
LIG1P18858 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.76□□□□□ -1.49
LIG1P18858 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
LIG1P18858 RGS17P1-201ENST00000423358 553 ntBASIC5.76□□□□□ -1.49
LIG1P18858 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.76□□□□□ -1.49
LIG1P18858 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.76□□□□□ -1.49
LIG1P18858 AL450023.3-201ENST00000440592 271 ntBASIC5.76□□□□□ -1.49
LIG1P18858 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.76□□□□□ -1.49
LIG1P18858 CACYBPP2-201ENST00000453625 678 ntBASIC5.76□□□□□ -1.49
LIG1P18858 AL389915.2-201ENST00000454576 441 ntBASIC5.76□□□□□ -1.49
LIG1P18858 AL356010.1-201ENST00000456364 102 ntBASIC5.76□□□□□ -1.49
LIG1P18858 AP1S2P1-201ENST00000457344 379 ntBASIC5.76□□□□□ -1.49
LIG1P18858 SNORD19B-201ENST00000459623 84 ntBASIC5.76□□□□□ -1.49
LIG1P18858 RPS17P2-201ENST00000461663 408 ntBASIC5.76□□□□□ -1.49
LIG1P18858 RN7SL441P-201ENST00000492388 296 ntBASIC5.76□□□□□ -1.49
LIG1P18858 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.76□□□□□ -1.49
LIG1P18858 BTF3P12-201ENST00000519620 469 ntBASIC5.76□□□□□ -1.49
LIG1P18858 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.76□□□□□ -1.49
LIG1P18858 BNIP3P1-201ENST00000547295 580 ntBASIC5.76□□□□□ -1.49
LIG1P18858 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.76□□□□□ -1.49
LIG1P18858 MIR4742-201ENST00000581069 85 ntBASIC5.76□□□□□ -1.49
LIG1P18858 AC104237.2-201ENST00000612456 443 ntBASIC5.76□□□□□ -1.49
LIG1P18858 AC090971.5-201ENST00000621102 293 ntBASIC5.76□□□□□ -1.49
LIG1P18858 AC018445.2-201ENST00000622987 260 ntBASIC5.76□□□□□ -1.49
LIG1P18858 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.76□□□□□ -1.49
LIG1P18858 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.76□□□□□ -1.49
LIG1P18858 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
LIG1P18858 AC006020.1-201ENST00000420179 1854 ntBASIC5.76□□□□□ -1.49
LIG1P18858 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LIG1P18858 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
LIG1P18858 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
LIG1P18858 AC092125.1-201ENST00000562568 1995 ntBASIC5.76□□□□□ -1.49
LIG1P18858 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LIG1P18858 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LIG1P18858 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LIG1P18858 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
LIG1P18858 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.75□□□□□ -1.49
LIG1P18858 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.75□□□□□ -1.49
LIG1P18858 AL592437.2-201ENST00000421655 2434 ntBASIC5.75□□□□□ -1.49
LIG1P18858 OR4G1P-203ENST00000641984 1631 ntBASIC5.75□□□□□ -1.49
LIG1P18858 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LIG1P18858 Y_RNA.216-201ENST00000364205 93 ntBASIC5.75□□□□□ -1.49
LIG1P18858 RNU6-853P-201ENST00000364306 107 ntBASIC5.75□□□□□ -1.49
LIG1P18858 Y_RNA.255-201ENST00000364581 97 ntBASIC5.75□□□□□ -1.49
LIG1P18858 SNORA32.2-201ENST00000384049 122 ntBASIC5.75□□□□□ -1.49
LIG1P18858 RNU1-106P-201ENST00000384382 164 ntBASIC5.75□□□□□ -1.49
LIG1P18858 RNU6-1160P-201ENST00000384546 104 ntBASIC5.75□□□□□ -1.49
LIG1P18858 MIR105-2-201ENST00000385083 81 ntBASIC5.75□□□□□ -1.49
LIG1P18858 PRRC2CP1-201ENST00000404428 159 ntBASIC5.75□□□□□ -1.49
LIG1P18858 RPL36AP10-201ENST00000421785 322 ntBASIC5.75□□□□□ -1.49
LIG1P18858 AC119618.1-201ENST00000434191 222 ntBASIC5.75□□□□□ -1.49
LIG1P18858 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.75□□□□□ -1.49
LIG1P18858 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.75□□□□□ -1.49
LIG1P18858 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.75□□□□□ -1.49
LIG1P18858 RPS20P32-201ENST00000456044 356 ntBASIC5.75□□□□□ -1.49
LIG1P18858 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
LIG1P18858 RNU7-63P-201ENST00000459054 62 ntBASIC5.75□□□□□ -1.49
LIG1P18858 RNU6-329P-201ENST00000459618 107 ntBASIC5.75□□□□□ -1.49
LIG1P18858 AC130509.1-201ENST00000464158 433 ntBASIC5.75□□□□□ -1.49
LIG1P18858 MRPS17P3-201ENST00000465453 385 ntBASIC5.75□□□□□ -1.49
LIG1P18858 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.75□□□□□ -1.49
LIG1P18858 AC090686.1-201ENST00000481577 749 ntBASIC5.75□□□□□ -1.49
LIG1P18858 EIF4EP3-201ENST00000498782 656 ntBASIC5.75□□□□□ -1.49
LIG1P18858 ENPP7P9-201ENST00000514456 627 ntBASIC5.75□□□□□ -1.49
LIG1P18858 RNU6-1314P-201ENST00000517139 104 ntBASIC5.75□□□□□ -1.49
LIG1P18858 AC107934.1-201ENST00000522215 217 ntBASIC5.75□□□□□ -1.49
LIG1P18858 SUB1P1-201ENST00000524415 382 ntBASIC5.75□□□□□ -1.49
LIG1P18858 PSMA2P1-201ENST00000526365 646 ntBASIC5.75□□□□□ -1.49
LIG1P18858 OR4R1P-201ENST00000529879 463 ntBASIC5.75□□□□□ -1.49
LIG1P18858 AC024940.3-201ENST00000538551 316 ntBASIC5.75□□□□□ -1.49
LIG1P18858 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.75□□□□□ -1.49
LIG1P18858 OR1F2P-201ENST00000570470 933 ntBASIC5.75□□□□□ -1.49
LIG1P18858 MIR3171-201ENST00000584270 74 ntBASIC5.75□□□□□ -1.49
LIG1P18858 AL353997.4-201ENST00000586196 166 ntBASIC5.75□□□□□ -1.49
LIG1P18858 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.75□□□□□ -1.49
LIG1P18858 Z84480.1-201ENST00000605131 311 ntBASIC5.75□□□□□ -1.49
LIG1P18858 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.75□□□□□ -1.49
LIG1P18858 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LIG1P18858 AC010205.1-201ENST00000616668 449 ntBASIC5.75□□□□□ -1.49
LIG1P18858 AL354950.2-201ENST00000617939 290 ntBASIC5.75□□□□□ -1.49
LIG1P18858 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LIG1P18858 AC135068.12-201ENST00000637370 931 ntBASIC5.75□□□□□ -1.49
LIG1P18858 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
LIG1P18858 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LIG1P18858 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LIG1P18858 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.75□□□□□ -1.49
LIG1P18858 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms