Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.77□□□□□ -1.81
PDGFRAP16234 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.77□□□□□ -1.81
PDGFRAP16234 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PDGFRAP16234 OR5AP1P-201ENST00000529730 940 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 AL139174.1-201ENST00000531489 886 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 SLC2A13P1-201ENST00000531560 322 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.77□□□□□ -1.81
PDGFRAP16234 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PDGFRAP16234 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.77□□□□□ -1.81
PDGFRAP16234 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.77□□□□□ -1.81
PDGFRAP16234 EEF1B2P4-201ENST00000551398 348 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 HSPE1P3-201ENST00000559254 309 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 AC023813.2-201ENST00000564321 469 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.77□□□□□ -1.81
PDGFRAP16234 MIR4637-201ENST00000582405 84 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 AC245036.5-201ENST00000596330 847 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 AC006254.3-201ENST00000603353 884 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 MTND3P19-201ENST00000603825 345 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 SNORA51-201ENST00000606420 132 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.77□□□□□ -1.81
PDGFRAP16234 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.77□□□□□ -1.81
PDGFRAP16234 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
PDGFRAP16234 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDGFRAP16234 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PDGFRAP16234 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.77□□□□□ -1.81
PDGFRAP16234 AC244517.1-201ENST00000606030 2086 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
PDGFRAP16234 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDGFRAP16234 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PDGFRAP16234 AP001350.1-201ENST00000601906 1524 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PDGFRAP16234 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.76□□□□□ -1.81
PDGFRAP16234 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.76□□□□□ -1.81
PDGFRAP16234 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 SNORD116.1-201ENST00000365628 92 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDGFRAP16234 RNU6-878P-201ENST00000384578 110 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 RNU6-906P-201ENST00000384700 70 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PDGFRAP16234 RNA5SP171-201ENST00000391071 115 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 ATP5A1P2-201ENST00000412323 255 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.76□□□□□ -1.81
PDGFRAP16234 RPS24P6-201ENST00000452670 400 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 snoU13.24-201ENST00000458998 104 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 AC026410.2-201ENST00000460281 156 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 HMGB1P25-201ENST00000468402 607 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 RPS15AP17-201ENST00000470598 390 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 HMGB3P15-201ENST00000507326 574 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 RN7SKP18-201ENST00000516005 275 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 RANP9-201ENST00000519957 271 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 AC109635.4-202ENST00000531666 412 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.76□□□□□ -1.81
PDGFRAP16234 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.76□□□□□ -1.81
PDGFRAP16234 MIR3690-201ENST00000580266 75 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 MIR4444-1-201ENST00000581696 74 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 MIR4444-2-201ENST00000584390 74 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.76□□□□□ -1.81
PDGFRAP16234 AC128687.1-201ENST00000605304 619 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 AC069209.1-201ENST00000619282 651 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 PLCE1P1-201ENST00000622094 305 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 MIR1322-201ENST00000638013 71 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.76□□□□□ -1.81
PDGFRAP16234 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDGFRAP16234 HSPA8P1-201ENST00000425843 1833 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDGFRAP16234 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.76□□□□□ -1.81
PDGFRAP16234 AC099786.3-201ENST00000565735 1410 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
PDGFRAP16234 AC007823.1-201ENST00000569932 1566 ntBASIC3.76□□□□□ -1.81
PDGFRAP16234 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDGFRAP16234 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.75□□□□□ -1.81
PDGFRAP16234 AL365440.1-201ENST00000436135 2167 ntBASIC3.75□□□□□ -1.81
PDGFRAP16234 AC116096.1-201ENST00000566804 2314 ntBASIC3.75□□□□□ -1.81
PDGFRAP16234 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PDGFRAP16234 SNORD9-201ENST00000362566 104 ntBASIC3.75□□□□□ -1.81
PDGFRAP16234 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PDGFRAP16234 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PDGFRAP16234 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.75□□□□□ -1.81
PDGFRAP16234 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.75□□□□□ -1.81
PDGFRAP16234 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.75□□□□□ -1.81
PDGFRAP16234 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PDGFRAP16234 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.75□□□□□ -1.81
PDGFRAP16234 RPS3AP50-201ENST00000487064 803 ntBASIC3.75□□□□□ -1.81
PDGFRAP16234 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.75□□□□□ -1.81
PDGFRAP16234 AC026412.2-201ENST00000512270 1075 ntBASIC3.75□□□□□ -1.81
PDGFRAP16234 RNU6-27P-201ENST00000516146 107 ntBASIC3.75□□□□□ -1.81
PDGFRAP16234 RN7SKP244-201ENST00000516513 307 ntBASIC3.75□□□□□ -1.81
PDGFRAP16234 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.75□□□□□ -1.81
PDGFRAP16234 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.75□□□□□ -1.81
PDGFRAP16234 AL121603.1-201ENST00000553815 142 ntBASIC3.75□□□□□ -1.81
PDGFRAP16234 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.75□□□□□ -1.81
PDGFRAP16234 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.75□□□□□ -1.81
PDGFRAP16234 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.75□□□□□ -1.81
PDGFRAP16234 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.75□□□□□ -1.81
PDGFRAP16234 AC107075.1-201ENST00000613695 314 ntBASIC3.75□□□□□ -1.81
PDGFRAP16234 AC109809.1-201ENST00000619665 545 ntBASIC3.75□□□□□ -1.81
PDGFRAP16234 AC006963.1-201ENST00000624003 1052 ntBASIC3.75□□□□□ -1.81
PDGFRAP16234 AC091925.2-201ENST00000625059 256 ntBASIC3.75□□□□□ -1.81
PDGFRAP16234 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDGFRAP16234 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms