Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNU1-43P-201ENST00000365052 165 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
COL6A2P12110 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
COL6A2P12110 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.89□□□□□ -1.63
COL6A2P12110 RNU6-606P-201ENST00000384721 111 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
COL6A2P12110 AL049697.2-201ENST00000403708 294 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 ARL4AP5-201ENST00000404372 599 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 FABP7P2-201ENST00000429946 379 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.89□□□□□ -1.63
COL6A2P12110 RPL23AP30-201ENST00000432419 501 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.89□□□□□ -1.63
COL6A2P12110 CBWD4P-201ENST00000445695 655 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.89□□□□□ -1.63
COL6A2P12110 AL353691.1-201ENST00000451332 387 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.89□□□□□ -1.63
COL6A2P12110 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.89□□□□□ -1.63
COL6A2P12110 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.89□□□□□ -1.63
COL6A2P12110 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.89□□□□□ -1.63
COL6A2P12110 GAPDHP56-201ENST00000506031 988 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.89□□□□□ -1.63
COL6A2P12110 AC021146.1-201ENST00000511202 716 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 SCARNA24.1-201ENST00000516465 137 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.89□□□□□ -1.63
COL6A2P12110 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.89□□□□□ -1.63
COL6A2P12110 OR8L1P-201ENST00000534005 955 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.89□□□□□ -1.63
COL6A2P12110 AC079075.1-201ENST00000559543 878 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 HMGB3P26-201ENST00000560051 582 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.89□□□□□ -1.63
COL6A2P12110 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.89□□□□□ -1.63
COL6A2P12110 RN7SL176P-201ENST00000580352 264 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 RN7SL52P-201ENST00000584271 284 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 FKBP1AP1-201ENST00000594588 318 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 AC004853.1-201ENST00000604902 698 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.89□□□□□ -1.63
COL6A2P12110 MIR6798-201ENST00000612887 67 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 AL159972.1-201ENST00000625150 448 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.89□□□□□ -1.63
COL6A2P12110 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL6A2P12110 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.89□□□□□ -1.63
COL6A2P12110 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
COL6A2P12110 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL6A2P12110 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL6A2P12110 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL6A2P12110 AP000542.2-201ENST00000623199 6179 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL6A2P12110 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL6A2P12110 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.88□□□□□ -1.63
COL6A2P12110 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.88□□□□□ -1.63
COL6A2P12110 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.88□□□□□ -1.63
COL6A2P12110 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL6A2P12110 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL6A2P12110 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL6A2P12110 RNU6-223P-201ENST00000362830 107 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 RN7SKP162-201ENST00000363605 345 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL6A2P12110 MIR1-2-201ENST00000384961 85 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 DUTP5-201ENST00000406790 469 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 U3.35-201ENST00000408405 208 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 RNU2-9P-201ENST00000410194 145 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 RN7SKP126-201ENST00000411143 300 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.88□□□□□ -1.63
COL6A2P12110 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.88□□□□□ -1.63
COL6A2P12110 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.88□□□□□ -1.63
COL6A2P12110 CFL1P1-202ENST00000432948 411 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.88□□□□□ -1.63
COL6A2P12110 RPS26P2-201ENST00000440331 348 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 AC104651.2-201ENST00000447549 528 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 AC140076.1-201ENST00000449897 361 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.88□□□□□ -1.63
COL6A2P12110 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.88□□□□□ -1.63
COL6A2P12110 NANOGP10-201ENST00000453325 895 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 MTND1P9-201ENST00000453775 944 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.88□□□□□ -1.63
COL6A2P12110 UBA52P7-201ENST00000486088 380 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 AC093278.1-201ENST00000494700 600 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 TMEM248P1-201ENST00000510579 951 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.88□□□□□ -1.63
COL6A2P12110 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.88□□□□□ -1.63
COL6A2P12110 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.88□□□□□ -1.63
COL6A2P12110 OR5BN1P-201ENST00000532955 829 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.88□□□□□ -1.63
COL6A2P12110 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.88□□□□□ -1.63
COL6A2P12110 AC125611.2-201ENST00000551907 647 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.88□□□□□ -1.63
COL6A2P12110 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.88□□□□□ -1.63
COL6A2P12110 TVP23CP2-201ENST00000571473 623 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.88□□□□□ -1.63
COL6A2P12110 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.88□□□□□ -1.63
COL6A2P12110 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.88□□□□□ -1.63
COL6A2P12110 AC105254.2-201ENST00000603636 436 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 AC007566.2-201ENST00000603642 413 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.88□□□□□ -1.63
COL6A2P12110 AC064836.2-201ENST00000609491 462 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 AC233309.1-201ENST00000619522 751 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL6A2P12110 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.88□□□□□ -1.63
COL6A2P12110 SAGE2P-201ENST00000420011 2126 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms