Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.97□□□□□ -1.77
PCNAP12004 RNU6-989P-201ENST00000362756 107 ntBASIC3.97□□□□□ -1.77
PCNAP12004 U3.4-201ENST00000363352 213 ntBASIC3.97□□□□□ -1.77
PCNAP12004 SNORD35B-201ENST00000363660 87 ntBASIC3.97□□□□□ -1.77
PCNAP12004 U1.1-201ENST00000384101 164 ntBASIC3.97□□□□□ -1.77
PCNAP12004 RNU6-339P-201ENST00000384310 107 ntBASIC3.97□□□□□ -1.77
PCNAP12004 MT-TC-201ENST00000387405 66 ntBASIC3.97□□□□□ -1.77
PCNAP12004 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.97□□□□□ -1.77
PCNAP12004 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.97□□□□□ -1.77
PCNAP12004 RPL36AP36-201ENST00000418616 301 ntBASIC3.97□□□□□ -1.77
PCNAP12004 Z99497.1-201ENST00000421282 135 ntBASIC3.97□□□□□ -1.77
PCNAP12004 RPL18P10-201ENST00000425606 538 ntBASIC3.97□□□□□ -1.77
PCNAP12004 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.97□□□□□ -1.77
PCNAP12004 AL590233.1-201ENST00000430017 456 ntBASIC3.97□□□□□ -1.77
PCNAP12004 AL365184.2-201ENST00000431139 435 ntBASIC3.97□□□□□ -1.77
PCNAP12004 AL512286.1-201ENST00000439244 400 ntBASIC3.97□□□□□ -1.77
PCNAP12004 AC006011.1-201ENST00000442758 349 ntBASIC3.97□□□□□ -1.77
PCNAP12004 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.97□□□□□ -1.77
PCNAP12004 AL162151.2-201ENST00000448875 158 ntBASIC3.97□□□□□ -1.77
PCNAP12004 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.97□□□□□ -1.77
PCNAP12004 RPL36AP13-201ENST00000457490 317 ntBASIC3.97□□□□□ -1.77
PCNAP12004 RPL23AP62-201ENST00000463396 453 ntBASIC3.97□□□□□ -1.77
PCNAP12004 AC078785.3-201ENST00000476607 425 ntBASIC3.97□□□□□ -1.77
PCNAP12004 AC105137.1-201ENST00000484355 562 ntBASIC3.97□□□□□ -1.77
PCNAP12004 RPL29P14-201ENST00000495837 428 ntBASIC3.97□□□□□ -1.77
PCNAP12004 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.97□□□□□ -1.77
PCNAP12004 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
PCNAP12004 AC093824.1-201ENST00000508796 343 ntBASIC3.97□□□□□ -1.77
PCNAP12004 AC109458.1-201ENST00000508858 316 ntBASIC3.97□□□□□ -1.77
PCNAP12004 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.97□□□□□ -1.77
PCNAP12004 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCNAP12004 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.97□□□□□ -1.77
PCNAP12004 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.97□□□□□ -1.77
PCNAP12004 OR8L1P-201ENST00000534005 955 ntBASIC3.97□□□□□ -1.77
PCNAP12004 OR6C7P-201ENST00000547875 934 ntBASIC3.97□□□□□ -1.77
PCNAP12004 AC012414.6-201ENST00000568241 401 ntBASIC3.97□□□□□ -1.77
PCNAP12004 MIR5186-201ENST00000577504 120 ntBASIC3.97□□□□□ -1.77
PCNAP12004 AP001004.1-201ENST00000582468 324 ntBASIC3.97□□□□□ -1.77
PCNAP12004 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.97□□□□□ -1.77
PCNAP12004 AC008507.1-201ENST00000587506 734 ntBASIC3.97□□□□□ -1.77
PCNAP12004 AL390208.1-201ENST00000605885 644 ntBASIC3.97□□□□□ -1.77
PCNAP12004 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.97□□□□□ -1.77
PCNAP12004 BX323046.1-201ENST00000610145 535 ntBASIC3.97□□□□□ -1.77
PCNAP12004 AC004009.2-201ENST00000623016 728 ntBASIC3.97□□□□□ -1.77
PCNAP12004 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.97□□□□□ -1.77
PCNAP12004 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
PCNAP12004 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCNAP12004 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCNAP12004 AP001148.1-201ENST00000624124 2359 ntBASIC3.97□□□□□ -1.77
PCNAP12004 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.97□□□□□ -1.77
PCNAP12004 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCNAP12004 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.96□□□□□ -1.77
PCNAP12004 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
PCNAP12004 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.96□□□□□ -1.77
PCNAP12004 AC116667.1-201ENST00000604855 2072 ntBASIC3.96□□□□□ -1.77
PCNAP12004 PABPC1P7-201ENST00000413177 1513 ntBASIC3.96□□□□□ -1.78
PCNAP12004 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
PCNAP12004 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.96□□□□□ -1.78
PCNAP12004 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.96□□□□□ -1.78
PCNAP12004 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PCNAP12004 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
PCNAP12004 MIR423-201ENST00000362201 94 ntBASIC3.96□□□□□ -1.78
PCNAP12004 Y_RNA.77-201ENST00000362962 107 ntBASIC3.96□□□□□ -1.78
PCNAP12004 Y_RNA.436-201ENST00000384097 102 ntBASIC3.96□□□□□ -1.78
PCNAP12004 SNORA37-201ENST00000384504 129 ntBASIC3.96□□□□□ -1.78
PCNAP12004 U3.29-201ENST00000391296 212 ntBASIC3.96□□□□□ -1.78
PCNAP12004 RPS3AP26-201ENST00000398259 784 ntBASIC3.96□□□□□ -1.78
PCNAP12004 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCNAP12004 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
PCNAP12004 MIR320C1-201ENST00000408566 88 ntBASIC3.96□□□□□ -1.78
PCNAP12004 SNORA3C-201ENST00000408792 125 ntBASIC3.96□□□□□ -1.78
PCNAP12004 AC109780.2-201ENST00000413467 845 ntBASIC3.96□□□□□ -1.78
PCNAP12004 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.96□□□□□ -1.78
PCNAP12004 AC012065.2-201ENST00000421295 375 ntBASIC3.96□□□□□ -1.78
PCNAP12004 AL445669.1-201ENST00000426743 755 ntBASIC3.96□□□□□ -1.78
PCNAP12004 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.96□□□□□ -1.78
PCNAP12004 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.96□□□□□ -1.78
PCNAP12004 AC010153.1-201ENST00000432862 727 ntBASIC3.96□□□□□ -1.78
PCNAP12004 BTF3P10-201ENST00000433415 495 ntBASIC3.96□□□□□ -1.78
PCNAP12004 SNRPEP7-201ENST00000438350 220 ntBASIC3.96□□□□□ -1.78
PCNAP12004 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.96□□□□□ -1.78
PCNAP12004 RPL23AP33-201ENST00000442301 452 ntBASIC3.96□□□□□ -1.78
PCNAP12004 HSPE1P28-201ENST00000443139 211 ntBASIC3.96□□□□□ -1.78
PCNAP12004 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.96□□□□□ -1.78
PCNAP12004 AC091564.1-201ENST00000464563 479 ntBASIC3.96□□□□□ -1.78
PCNAP12004 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.96□□□□□ -1.78
PCNAP12004 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.96□□□□□ -1.78
PCNAP12004 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.96□□□□□ -1.78
PCNAP12004 AC093809.1-201ENST00000509155 340 ntBASIC3.96□□□□□ -1.78
PCNAP12004 AC091965.2-201ENST00000512324 613 ntBASIC3.96□□□□□ -1.78
PCNAP12004 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.96□□□□□ -1.78
PCNAP12004 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PCNAP12004 AC093677.1-201ENST00000514414 678 ntBASIC3.96□□□□□ -1.78
PCNAP12004 AC099522.1-202ENST00000514718 367 ntBASIC3.96□□□□□ -1.78
PCNAP12004 RNA5SP216-201ENST00000516111 123 ntBASIC3.96□□□□□ -1.78
PCNAP12004 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.96□□□□□ -1.78
PCNAP12004 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.96□□□□□ -1.78
PCNAP12004 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.96□□□□□ -1.78
PCNAP12004 COX6CP8-201ENST00000522620 226 ntBASIC3.96□□□□□ -1.78
PCNAP12004 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms