Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 NUP58P1-201ENST00000502546 1738 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 Y_RNA.31-201ENST00000362574 102 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 SNORA2.3-201ENST00000383920 135 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 RNU6-456P-201ENST00000384493 107 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 SNORD116-29-201ENST00000384516 83 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 REREP1Y-201ENST00000422655 198 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 PSMA6P3-201ENST00000428242 164 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 AL359265.2-201ENST00000434367 631 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 REREP2Y-201ENST00000439103 200 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 BNIP3P2-201ENST00000441221 577 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 SLC25A18P1-201ENST00000449385 454 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 RNU6-329P-201ENST00000459618 107 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 AC103987.1-201ENST00000473394 348 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 AC010683.1-201ENST00000473673 378 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 RPS24P16-201ENST00000497294 392 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 MEPE-206ENST00000511670 550 ntTSL 4 BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 AC092470.1-201ENST00000546187 132 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 AC091925.1-201ENST00000623204 462 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 LARP1BP1-201ENST00000506036 1359 ntBASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CSB-PGBD3P0DP91 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 Z95114.1-201ENST00000624264 14574 ntBASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 MTCO1P12-201ENST00000414273 1543 ntBASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 AP001350.1-201ENST00000601906 1524 ntBASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 RNU5E-1-201ENST00000362477 120 ntBASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 SNORD82-201ENST00000365530 70 ntBASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 Y_RNA.452-201ENST00000384202 108 ntBASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 SNORA70.10-201ENST00000384515 134 ntBASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 SNORA77-201ENST00000408716 125 ntBASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 RPS15AP9-201ENST00000439856 381 ntBASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 AL136380.1-201ENST00000447970 162 ntBASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 AURKAPS2-201ENST00000454983 333 ntBASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 CR383656.1-201ENST00000484916 377 ntBASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 NPM1P41-201ENST00000512920 831 ntBASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 AC017037.2-201ENST00000513850 890 ntBASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 ATM-228ENST00000639240 498 ntTSL 5 BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 PHKBP1-201ENST00000450951 1951 ntBASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CSB-PGBD3P0DP91 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 RNU1-130P-201ENST00000363930 160 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 Y_RNA.193-201ENST00000363979 102 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 RN7SKP186-201ENST00000365371 303 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 BTBD10P2-201ENST00000404779 676 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 RN7SKP106-201ENST00000410832 272 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 AC019097.1-201ENST00000424783 735 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 PRPF38AP1-201ENST00000451976 933 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 snoU13.8-201ENST00000458890 104 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 RN7SL814P-201ENST00000487715 300 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 RPS4XP18-201ENST00000495480 763 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms