Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLPTM1O96005 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.62□□□□□ -1.83
CLPTM1O96005 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLPTM1O96005 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLPTM1O96005 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLPTM1O96005 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.62□□□□□ -1.83
CLPTM1O96005 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CLPTM1O96005 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLPTM1O96005 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CLPTM1O96005 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CLPTM1O96005 RNU1-85P-201ENST00000364127 164 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.61□□□□□ -1.83
CLPTM1O96005 RNU6-1122P-201ENST00000384449 107 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 FABP12P1-201ENST00000401911 322 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 CYCSP45-201ENST00000402289 315 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 RNU6-920P-201ENST00000410926 92 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 USP9YP33-201ENST00000412220 421 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.61□□□□□ -1.83
CLPTM1O96005 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.61□□□□□ -1.83
CLPTM1O96005 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLPTM1O96005 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.61□□□□□ -1.83
CLPTM1O96005 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.61□□□□□ -1.83
CLPTM1O96005 BTF3P10-201ENST00000433415 495 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.61□□□□□ -1.83
CLPTM1O96005 USP9YP35-201ENST00000435696 412 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.61□□□□□ -1.83
CLPTM1O96005 NPM1P49-201ENST00000448027 714 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 RPS17P13-201ENST00000448974 407 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLPTM1O96005 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.61□□□□□ -1.83
CLPTM1O96005 RPL31P3-201ENST00000458430 332 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 RPL37P6-202ENST00000464216 403 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 AP000893.1-201ENST00000474462 794 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLPTM1O96005 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.61□□□□□ -1.83
CLPTM1O96005 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.61□□□□□ -1.83
CLPTM1O96005 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLPTM1O96005 RNU6-678P-201ENST00000516832 109 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.61□□□□□ -1.83
CLPTM1O96005 NDUFB9P3-201ENST00000521269 501 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 ARL2BPP5-201ENST00000523141 481 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.61□□□□□ -1.83
CLPTM1O96005 AC008489.1-201ENST00000524271 483 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.61□□□□□ -1.83
CLPTM1O96005 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.61□□□□□ -1.83
CLPTM1O96005 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.61□□□□□ -1.83
CLPTM1O96005 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.61□□□□□ -1.83
CLPTM1O96005 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.61□□□□□ -1.83
CLPTM1O96005 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.61□□□□□ -1.83
CLPTM1O96005 AC025884.1-201ENST00000556034 378 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.61□□□□□ -1.83
CLPTM1O96005 NBR2-204ENST00000587322 63 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.61□□□□□ -1.83
CLPTM1O96005 AC135507.1-201ENST00000607214 561 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 AC092653.1-201ENST00000608509 531 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 AC092650.2-201ENST00000619984 902 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 AL031667.3-201ENST00000620124 655 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 MIR8059-201ENST00000620427 81 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.61□□□□□ -1.83
CLPTM1O96005 AC092192.1-201ENST00000633154 1018 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLPTM1O96005 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLPTM1O96005 AC005183.1-201ENST00000603687 1979 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 OR5BR1P-201ENST00000524992 1330 ntBASIC3.61□□□□□ -1.83
CLPTM1O96005 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLPTM1O96005 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
CLPTM1O96005 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.6□□□□□ -1.83
CLPTM1O96005 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLPTM1O96005 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.6□□□□□ -1.83
CLPTM1O96005 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLPTM1O96005 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLPTM1O96005 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CLPTM1O96005 SNRPEP3-201ENST00000338402 276 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 RNU6-283P-201ENST00000364788 107 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.6□□□□□ -1.83
CLPTM1O96005 RNU6-441P-201ENST00000384545 106 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 RPS26P8-201ENST00000393490 348 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 SNRPEP2-201ENST00000397592 279 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 AL031577.2-201ENST00000404133 280 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 AP000567.1-201ENST00000406413 156 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.6□□□□□ -1.83
CLPTM1O96005 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.6□□□□□ -1.83
CLPTM1O96005 RPL31P2-201ENST00000413849 377 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 SDCBPP2-201ENST00000424643 885 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 MTND1P20-201ENST00000430341 950 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 AL358472.1-201ENST00000431295 329 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.6□□□□□ -1.83
CLPTM1O96005 AL590103.1-201ENST00000434488 307 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.6□□□□□ -1.83
CLPTM1O96005 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.6□□□□□ -1.83
CLPTM1O96005 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.6□□□□□ -1.83
CLPTM1O96005 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.6□□□□□ -1.83
CLPTM1O96005 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.6□□□□□ -1.83
CLPTM1O96005 HMGN3P1-201ENST00000453847 193 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.6□□□□□ -1.83
CLPTM1O96005 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.6□□□□□ -1.83
CLPTM1O96005 RPL7P1-201ENST00000468161 747 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 RPL7P9-201ENST00000468715 747 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 RPL7P19-201ENST00000469948 618 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms