Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.43□□□□□ -1.7
RRP9O43818 RPL31P45-201ENST00000419532 356 ntBASIC4.43□□□□□ -1.7
RRP9O43818 FAR2P4-202ENST00000425399 584 ntBASIC4.43□□□□□ -1.7
RRP9O43818 AL445669.1-201ENST00000426743 755 ntBASIC4.43□□□□□ -1.7
RRP9O43818 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.43□□□□□ -1.7
RRP9O43818 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.43□□□□□ -1.7
RRP9O43818 Z74696.2-201ENST00000436514 498 ntBASIC4.43□□□□□ -1.7
RRP9O43818 SUMO2P3-201ENST00000438311 288 ntBASIC4.43□□□□□ -1.7
RRP9O43818 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.43□□□□□ -1.7
RRP9O43818 RPL7P36-201ENST00000444633 681 ntBASIC4.43□□□□□ -1.7
RRP9O43818 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.43□□□□□ -1.7
RRP9O43818 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RRP9O43818 AP000542.1-201ENST00000448473 371 ntBASIC4.43□□□□□ -1.7
RRP9O43818 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.43□□□□□ -1.7
RRP9O43818 Z92846.1-201ENST00000456203 268 ntBASIC4.43□□□□□ -1.7
RRP9O43818 BTF3P5-201ENST00000457252 467 ntBASIC4.43□□□□□ -1.7
RRP9O43818 AC104763.1-201ENST00000475274 360 ntBASIC4.43□□□□□ -1.7
RRP9O43818 RN7SL174P-201ENST00000475578 289 ntBASIC4.43□□□□□ -1.7
RRP9O43818 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.43□□□□□ -1.7
RRP9O43818 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.43□□□□□ -1.7
RRP9O43818 BNIP3P41-201ENST00000503774 571 ntBASIC4.43□□□□□ -1.7
RRP9O43818 AC106872.4-201ENST00000510050 523 ntBASIC4.43□□□□□ -1.7
RRP9O43818 RNA5SP380-201ENST00000517190 98 ntBASIC4.43□□□□□ -1.7
RRP9O43818 IGKV3D-34-201ENST00000522638 302 ntBASIC4.43□□□□□ -1.7
RRP9O43818 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.43□□□□□ -1.7
RRP9O43818 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.43□□□□□ -1.7
RRP9O43818 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.43□□□□□ -1.7
RRP9O43818 TPMTP1-201ENST00000592307 737 ntBASIC4.43□□□□□ -1.7
RRP9O43818 BNIP3P8-201ENST00000597863 560 ntBASIC4.43□□□□□ -1.7
RRP9O43818 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.43□□□□□ -1.7
RRP9O43818 AC015871.2-201ENST00000603605 948 ntBASIC4.43□□□□□ -1.7
RRP9O43818 AC112191.3-201ENST00000604371 277 ntBASIC4.43□□□□□ -1.7
RRP9O43818 AL390208.1-201ENST00000605885 644 ntBASIC4.43□□□□□ -1.7
RRP9O43818 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.43□□□□□ -1.7
RRP9O43818 AC000068.2-201ENST00000608816 460 ntBASIC4.43□□□□□ -1.7
RRP9O43818 AC006566.1-201ENST00000608943 513 ntBASIC4.43□□□□□ -1.7
RRP9O43818 AC008498.1-201ENST00000613012 531 ntBASIC4.43□□□□□ -1.7
RRP9O43818 AC108479.2-201ENST00000617314 601 ntBASIC4.43□□□□□ -1.7
RRP9O43818 AL139089.1-201ENST00000620372 975 ntBASIC4.43□□□□□ -1.7
RRP9O43818 MIR4496-201ENST00000635896 61 ntBASIC4.43□□□□□ -1.7
RRP9O43818 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.43□□□□□ -1.7
RRP9O43818 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RRP9O43818 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RRP9O43818 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RRP9O43818 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.42□□□□□ -1.7
RRP9O43818 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
RRP9O43818 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.42□□□□□ -1.7
RRP9O43818 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.42□□□□□ -1.7
RRP9O43818 RNU6-28P-201ENST00000362378 107 ntBASIC4.42□□□□□ -1.7
RRP9O43818 RNY4P24-201ENST00000362735 96 ntBASIC4.42□□□□□ -1.7
RRP9O43818 RNA5SP319-201ENST00000362768 119 ntBASIC4.42□□□□□ -1.7
RRP9O43818 RNU6-744P-201ENST00000365557 107 ntBASIC4.42□□□□□ -1.7
RRP9O43818 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RRP9O43818 RNU6-730P-201ENST00000383954 104 ntBASIC4.42□□□□□ -1.7
RRP9O43818 RNU6-1316P-201ENST00000384242 108 ntBASIC4.42□□□□□ -1.7
RRP9O43818 SNORA40.3-201ENST00000390964 122 ntBASIC4.42□□□□□ -1.7
RRP9O43818 AL049697.2-201ENST00000403708 294 ntBASIC4.42□□□□□ -1.7
RRP9O43818 RNU2-66P-201ENST00000410650 161 ntBASIC4.42□□□□□ -1.7
RRP9O43818 NPM1P4-201ENST00000414095 812 ntBASIC4.42□□□□□ -1.7
RRP9O43818 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.42□□□□□ -1.7
RRP9O43818 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.42□□□□□ -1.7
RRP9O43818 USP9YP13-201ENST00000417797 480 ntBASIC4.42□□□□□ -1.7
RRP9O43818 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.42□□□□□ -1.7
RRP9O43818 RPL17P36-201ENST00000420302 549 ntBASIC4.42□□□□□ -1.7
RRP9O43818 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.42□□□□□ -1.7
RRP9O43818 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.42□□□□□ -1.7
RRP9O43818 OR51AB1P-201ENST00000429046 620 ntBASIC4.42□□□□□ -1.7
RRP9O43818 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.42□□□□□ -1.7
RRP9O43818 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.42□□□□□ -1.7
RRP9O43818 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.42□□□□□ -1.7
RRP9O43818 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
RRP9O43818 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.42□□□□□ -1.7
RRP9O43818 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.42□□□□□ -1.7
RRP9O43818 AL590365.1-201ENST00000450788 243 ntBASIC4.42□□□□□ -1.7
RRP9O43818 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.42□□□□□ -1.7
RRP9O43818 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.42□□□□□ -1.7
RRP9O43818 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.42□□□□□ -1.7
RRP9O43818 AL033528.1-201ENST00000453780 140 ntBASIC4.42□□□□□ -1.7
RRP9O43818 AC079168.2-201ENST00000453977 416 ntBASIC4.42□□□□□ -1.7
RRP9O43818 HMGB3P30-201ENST00000457863 606 ntBASIC4.42□□□□□ -1.7
RRP9O43818 snoU109.1-201ENST00000459339 135 ntBASIC4.42□□□□□ -1.7
RRP9O43818 RPL37P6-202ENST00000464216 403 ntBASIC4.42□□□□□ -1.7
RRP9O43818 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
RRP9O43818 AC022034.3-201ENST00000471393 478 ntBASIC4.42□□□□□ -1.7
RRP9O43818 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RRP9O43818 AP001025.2-201ENST00000490908 477 ntBASIC4.42□□□□□ -1.7
RRP9O43818 RN7SL466P-201ENST00000497546 295 ntBASIC4.42□□□□□ -1.7
RRP9O43818 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.42□□□□□ -1.7
RRP9O43818 RN7SKP298-201ENST00000515950 94 ntBASIC4.42□□□□□ -1.7
RRP9O43818 RN7SKP289-201ENST00000517244 295 ntBASIC4.42□□□□□ -1.7
RRP9O43818 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.42□□□□□ -1.7
RRP9O43818 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.42□□□□□ -1.7
RRP9O43818 OR5BC1P-201ENST00000529327 739 ntBASIC4.42□□□□□ -1.7
RRP9O43818 AC011602.1-201ENST00000546484 331 ntBASIC4.42□□□□□ -1.7
RRP9O43818 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.42□□□□□ -1.7
RRP9O43818 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.42□□□□□ -1.7
RRP9O43818 AC245505.1-201ENST00000556398 224 ntBASIC4.42□□□□□ -1.7
RRP9O43818 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.42□□□□□ -1.7
RRP9O43818 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.42□□□□□ -1.7
RRP9O43818 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms