Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SMAD6O43541 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SMAD6O43541 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SMAD6O43541 AC011266.1-201ENST00000624119 3569 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
SMAD6O43541 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.75
SMAD6O43541 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
SMAD6O43541 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.09□□□□□ -1.75
SMAD6O43541 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.09□□□□□ -1.75
SMAD6O43541 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.09□□□□□ -1.75
SMAD6O43541 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.09□□□□□ -1.75
SMAD6O43541 RNU2-42P-201ENST00000410697 113 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.09□□□□□ -1.75
SMAD6O43541 RPL17P36-201ENST00000420302 549 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.09□□□□□ -1.75
SMAD6O43541 ZNF863P-201ENST00000426746 417 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.09□□□□□ -1.75
SMAD6O43541 AC069285.2-201ENST00000440210 275 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SMAD6O43541 PNPLA4P1-201ENST00000458328 305 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 OR9M1P-201ENST00000459641 921 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 AP000873.1-201ENST00000463987 400 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 TMED11P-201ENST00000479478 690 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 RPL21P103-201ENST00000479921 488 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 AC006517.1-201ENST00000480485 328 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.09□□□□□ -1.75
SMAD6O43541 RN7SKP31-201ENST00000516354 278 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.09□□□□□ -1.75
SMAD6O43541 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.09□□□□□ -1.75
SMAD6O43541 AC118273.2-201ENST00000532092 465 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.09□□□□□ -1.75
SMAD6O43541 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.09□□□□□ -1.75
SMAD6O43541 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.09□□□□□ -1.75
SMAD6O43541 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.09□□□□□ -1.75
SMAD6O43541 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.09□□□□□ -1.75
SMAD6O43541 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.09□□□□□ -1.75
SMAD6O43541 GTF2IP8-201ENST00000560687 584 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 MIR4528-201ENST00000577763 90 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 RN7SL703P-201ENST00000578485 302 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.09□□□□□ -1.75
SMAD6O43541 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.09□□□□□ -1.75
SMAD6O43541 MIR548Y-201ENST00000582739 110 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 AC053481.4-201ENST00000583164 216 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.09□□□□□ -1.75
SMAD6O43541 MIR548AB-201ENST00000584917 84 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 AC022916.3-201ENST00000592961 742 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.09□□□□□ -1.75
SMAD6O43541 VN1R92P-201ENST00000598511 928 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 AC012065.4-201ENST00000602445 679 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 AL020997.2-201ENST00000602607 184 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 AC008638.3-201ENST00000603341 463 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 AL139395.1-201ENST00000603662 160 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 AC006566.1-201ENST00000608943 513 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 MIR6500-201ENST00000622700 86 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 AC008785.1-201ENST00000624475 456 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 TEX21P-201ENST00000447107 1476 ntBASIC4.09□□□□□ -1.75
SMAD6O43541 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SMAD6O43541 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
SMAD6O43541 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.09□□□□□ -1.76
SMAD6O43541 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
SMAD6O43541 EXOC5P1-201ENST00000510543 1969 ntBASIC4.09□□□□□ -1.76
SMAD6O43541 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.09□□□□□ -1.76
SMAD6O43541 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.09□□□□□ -1.76
SMAD6O43541 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SMAD6O43541 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SMAD6O43541 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SMAD6O43541 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SMAD6O43541 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SMAD6O43541 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SMAD6O43541 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SMAD6O43541 RNU6-797P-201ENST00000363101 109 ntBASIC4.08□□□□□ -1.76
SMAD6O43541 RNU5D-1-201ENST00000363299 116 ntBASIC4.08□□□□□ -1.76
SMAD6O43541 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
SMAD6O43541 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.08□□□□□ -1.76
SMAD6O43541 RNU6-98P-201ENST00000384173 107 ntBASIC4.08□□□□□ -1.76
SMAD6O43541 Y_RNA.554-201ENST00000384672 102 ntBASIC4.08□□□□□ -1.76
SMAD6O43541 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SMAD6O43541 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SMAD6O43541 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.08□□□□□ -1.76
SMAD6O43541 AC245052.5-201ENST00000416320 649 ntBASIC4.08□□□□□ -1.76
SMAD6O43541 Z97055.1-201ENST00000419730 712 ntBASIC4.08□□□□□ -1.76
SMAD6O43541 RPL31P54-201ENST00000429803 370 ntBASIC4.08□□□□□ -1.76
SMAD6O43541 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.08□□□□□ -1.76
SMAD6O43541 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.08□□□□□ -1.76
SMAD6O43541 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.08□□□□□ -1.76
SMAD6O43541 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SMAD6O43541 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.08□□□□□ -1.76
SMAD6O43541 AL512286.1-201ENST00000439244 400 ntBASIC4.08□□□□□ -1.76
SMAD6O43541 DNAJC19P4-201ENST00000440115 345 ntBASIC4.08□□□□□ -1.76
SMAD6O43541 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.08□□□□□ -1.76
SMAD6O43541 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.08□□□□□ -1.76
SMAD6O43541 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.08□□□□□ -1.76
SMAD6O43541 UBE2V1P7-201ENST00000446395 340 ntBASIC4.08□□□□□ -1.76
SMAD6O43541 AC104306.1-201ENST00000449702 371 ntBASIC4.08□□□□□ -1.76
SMAD6O43541 PPIAP3-201ENST00000450588 505 ntBASIC4.08□□□□□ -1.76
SMAD6O43541 RPL30P9-201ENST00000465586 330 ntBASIC4.08□□□□□ -1.76
SMAD6O43541 RPL31P58-201ENST00000469001 379 ntBASIC4.08□□□□□ -1.76
SMAD6O43541 RN7SL585P-201ENST00000470538 280 ntBASIC4.08□□□□□ -1.76
SMAD6O43541 VN1R105P-201ENST00000486595 910 ntBASIC4.08□□□□□ -1.76
SMAD6O43541 OR4G11P-201ENST00000492842 939 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms