Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC073387.2-201ENST00000604797 784 ntBASIC3.12□□□□□ -1.91
LSM1O15116 AL359198.2-201ENST00000611836 194 ntBASIC3.12□□□□□ -1.91
LSM1O15116 MIR8084-201ENST00000614105 89 ntBASIC3.12□□□□□ -1.91
LSM1O15116 AL355810.1-201ENST00000614629 552 ntBASIC3.12□□□□□ -1.91
LSM1O15116 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.12□□□□□ -1.91
LSM1O15116 AC106730.3-201ENST00000624568 641 ntBASIC3.12□□□□□ -1.91
LSM1O15116 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.12□□□□□ -1.91
LSM1O15116 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.12□□□□□ -1.91
LSM1O15116 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.12□□□□□ -1.91
LSM1O15116 AL136520.1-201ENST00000600311 1322 ntBASIC3.12□□□□□ -1.91
LSM1O15116 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LSM1O15116 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
LSM1O15116 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LSM1O15116 MTND5P24-201ENST00000438892 1767 ntBASIC3.11□□□□□ -1.91
LSM1O15116 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.11□□□□□ -1.91
LSM1O15116 U3.6-201ENST00000363622 211 ntBASIC3.11□□□□□ -1.91
LSM1O15116 MIR554-201ENST00000384874 96 ntBASIC3.11□□□□□ -1.91
LSM1O15116 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
LSM1O15116 AL356967.1-201ENST00000406305 431 ntBASIC3.11□□□□□ -1.91
LSM1O15116 RNU6-712P-201ENST00000410558 100 ntBASIC3.11□□□□□ -1.91
LSM1O15116 RPL32P35-201ENST00000415214 394 ntBASIC3.11□□□□□ -1.91
LSM1O15116 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.11□□□□□ -1.91
LSM1O15116 BX842559.1-201ENST00000419615 532 ntBASIC3.11□□□□□ -1.91
LSM1O15116 FAM204CP-201ENST00000424489 642 ntBASIC3.11□□□□□ -1.91
LSM1O15116 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.11□□□□□ -1.91
LSM1O15116 AL035410.1-201ENST00000427409 427 ntBASIC3.11□□□□□ -1.91
LSM1O15116 OR2AS1P-201ENST00000427827 319 ntBASIC3.11□□□□□ -1.91
LSM1O15116 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.11□□□□□ -1.91
LSM1O15116 AC018644.1-201ENST00000429934 551 ntBASIC3.11□□□□□ -1.91
LSM1O15116 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.11□□□□□ -1.91
LSM1O15116 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.11□□□□□ -1.91
LSM1O15116 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.11□□□□□ -1.91
LSM1O15116 RPL39P40-201ENST00000445481 146 ntBASIC3.11□□□□□ -1.91
LSM1O15116 AL050341.1-201ENST00000447743 313 ntBASIC3.11□□□□□ -1.91
LSM1O15116 RPL7P55-201ENST00000450522 746 ntBASIC3.11□□□□□ -1.91
LSM1O15116 AL445669.2-201ENST00000454425 421 ntBASIC3.11□□□□□ -1.91
LSM1O15116 TRBV26-201ENST00000456572 344 ntBASIC3.11□□□□□ -1.91
LSM1O15116 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.11□□□□□ -1.91
LSM1O15116 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.11□□□□□ -1.91
LSM1O15116 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.11□□□□□ -1.91
LSM1O15116 AC011352.3-201ENST00000505162 593 ntBASIC3.11□□□□□ -1.91
LSM1O15116 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.11□□□□□ -1.91
LSM1O15116 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.11□□□□□ -1.91
LSM1O15116 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.11□□□□□ -1.91
LSM1O15116 NIFKP8-201ENST00000560500 874 ntBASIC3.11□□□□□ -1.91
LSM1O15116 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.11□□□□□ -1.91
LSM1O15116 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.11□□□□□ -1.91
LSM1O15116 AC124283.4-201ENST00000581815 456 ntBASIC3.11□□□□□ -1.91
LSM1O15116 MIR4276-201ENST00000584832 70 ntBASIC3.11□□□□□ -1.91
LSM1O15116 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.11□□□□□ -1.91
LSM1O15116 AL157817.1-201ENST00000614264 790 ntBASIC3.11□□□□□ -1.91
LSM1O15116 AC004696.1-201ENST00000614345 607 ntBASIC3.11□□□□□ -1.91
LSM1O15116 AL445493.3-201ENST00000619568 477 ntBASIC3.11□□□□□ -1.91
LSM1O15116 AC034229.5-201ENST00000624258 185 ntBASIC3.11□□□□□ -1.91
LSM1O15116 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.11□□□□□ -1.91
LSM1O15116 HPVC1-201ENST00000629899 1198 ntBASIC3.11□□□□□ -1.91
LSM1O15116 AC012442.3-202ENST00000636742 206 ntBASIC3.11□□□□□ -1.91
LSM1O15116 AL049780.3-201ENST00000624612 1583 ntBASIC3.11□□□□□ -1.91
LSM1O15116 AC093831.2-201ENST00000624393 3427 ntBASIC3.11□□□□□ -1.91
LSM1O15116 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LSM1O15116 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.11□□□□□ -1.91
LSM1O15116 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LSM1O15116 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.11□□□□□ -1.91
LSM1O15116 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LSM1O15116 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LSM1O15116 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LSM1O15116 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LSM1O15116 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
LSM1O15116 RNU6-251P-201ENST00000363235 104 ntBASIC3.1□□□□□ -1.91
LSM1O15116 RNVU1-3-201ENST00000364313 161 ntBASIC3.1□□□□□ -1.91
LSM1O15116 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
LSM1O15116 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.1□□□□□ -1.91
LSM1O15116 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
LSM1O15116 U3.29-201ENST00000391296 212 ntBASIC3.1□□□□□ -1.91
LSM1O15116 RNU6-1077P-201ENST00000410506 102 ntBASIC3.1□□□□□ -1.91
LSM1O15116 RPL19P1-201ENST00000411635 428 ntBASIC3.1□□□□□ -1.91
LSM1O15116 AC099677.1-201ENST00000420575 175 ntBASIC3.1□□□□□ -1.91
LSM1O15116 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.1□□□□□ -1.91
LSM1O15116 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.1□□□□□ -1.91
LSM1O15116 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LSM1O15116 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LSM1O15116 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.1□□□□□ -1.91
LSM1O15116 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.1□□□□□ -1.91
LSM1O15116 AC091564.1-201ENST00000464563 479 ntBASIC3.1□□□□□ -1.91
LSM1O15116 AC104472.2-201ENST00000469035 601 ntBASIC3.1□□□□□ -1.91
LSM1O15116 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.1□□□□□ -1.91
LSM1O15116 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.1□□□□□ -1.91
LSM1O15116 AC025768.1-201ENST00000510057 267 ntBASIC3.1□□□□□ -1.91
LSM1O15116 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LSM1O15116 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.1□□□□□ -1.91
LSM1O15116 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.1□□□□□ -1.91
LSM1O15116 AC018630.1-201ENST00000541376 925 ntBASIC3.1□□□□□ -1.91
LSM1O15116 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.1□□□□□ -1.91
LSM1O15116 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.1□□□□□ -1.91
LSM1O15116 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.1□□□□□ -1.91
LSM1O15116 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.1□□□□□ -1.91
LSM1O15116 MIR5186-201ENST00000577504 120 ntBASIC3.1□□□□□ -1.91
LSM1O15116 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.1□□□□□ -1.91
LSM1O15116 AC096947.1-201ENST00000603233 470 ntBASIC3.1□□□□□ -1.91
LSM1O15116 AC006329.2-201ENST00000611491 394 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms