Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC245052.5-201ENST00000416320 649 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 Z99497.1-201ENST00000421282 135 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM38O00635 RPS12P5-201ENST00000423449 371 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM38O00635 EZH2P1-201ENST00000431167 291 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 AC091862.1-201ENST00000438016 1100 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM38O00635 AL118496.2-201ENST00000448300 230 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 AC093392.2-201ENST00000450682 337 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 FGF7P6-202ENST00000451282 293 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 RPL5P32-201ENST00000454085 879 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 ARPC3P2-201ENST00000457786 533 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 TPT1P7-201ENST00000458300 517 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 snoU109.4-201ENST00000458953 143 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 RPL5P30-201ENST00000465511 891 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 SETP11-201ENST00000473027 690 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 RN7SL810P-201ENST00000493031 276 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM38O00635 RPL37P25-201ENST00000507308 276 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 AC093853.1-201ENST00000515689 483 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 AC118273.2-201ENST00000532092 465 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM38O00635 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM38O00635 AL121579.1-201ENST00000555129 305 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TRIM38O00635 AC107954.1-201ENST00000565906 727 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM38O00635 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM38O00635 AC005034.5-201ENST00000604219 466 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 AC092954.2-201ENST00000609103 430 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 AC010678.1-201ENST00000614118 713 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 AC126177.8-201ENST00000618339 1015 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TRIM38O00635 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM38O00635 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TRIM38O00635 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM38O00635 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM38O00635 AL022578.1-201ENST00000439330 1433 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM38O00635 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM38O00635 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
TRIM38O00635 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM38O00635 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
TRIM38O00635 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
TRIM38O00635 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM38O00635 AC105074.1-201ENST00000623380 3095 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 U3.4-201ENST00000363352 213 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 RNA5SP22-201ENST00000365393 109 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 U3.15-201ENST00000365398 212 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 RNA5SP151-201ENST00000365632 117 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM38O00635 Y_RNA.493-201ENST00000384422 102 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 RNU6-837P-201ENST00000391056 108 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 RNU6-952P-201ENST00000391164 108 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM38O00635 AC011933.1-201ENST00000413334 321 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.44□□□□□ -1.7
TRIM38O00635 MTND1P14-201ENST00000427400 950 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 AC104651.1-201ENST00000427559 735 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM38O00635 MTND5P14-201ENST00000441481 1267 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 WASF1P1-201ENST00000447560 1131 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM38O00635 PAXBP1P1-201ENST00000449315 447 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 OR6C5P-201ENST00000452388 923 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM38O00635 AC116533.1-201ENST00000459748 321 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 AC010469.1-201ENST00000463864 576 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 AC104563.1-201ENST00000476147 376 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 AC096751.1-202ENST00000502691 1067 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 AC108145.1-201ENST00000503770 153 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 MTND2P33-201ENST00000506452 1031 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 RNA5SP154-201ENST00000516193 111 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 SNORA31.9-201ENST00000516429 84 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM38O00635 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.44□□□□□ -1.7
TRIM38O00635 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM38O00635 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM38O00635 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.44□□□□□ -1.7
TRIM38O00635 AC069240.1-201ENST00000548774 375 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM38O00635 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM38O00635 PSMB7P1-201ENST00000556349 514 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM38O00635 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM38O00635 WISP1-OT1-201ENST00000602893 642 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 IGHV3-29-201ENST00000604817 344 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 AC023043.4-201ENST00000612081 449 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 AC067931.1-201ENST00000624190 671 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 OR5AK4P-201ENST00000635912 903 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM38O00635 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM38O00635 AC087190.4-201ENST00000574616 8334 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 AC135352.1-201ENST00000506173 1418 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM38O00635 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms