Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC112200.1-201ENST00000625015 234 ntBASIC5.58□□□□□ -1.52
SOX1O00570 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SOX1O00570 HSPD1P8-201ENST00000400121 1658 ntBASIC5.58□□□□□ -1.52
SOX1O00570 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.58□□□□□ -1.52
SOX1O00570 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SOX1O00570 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SOX1O00570 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.58□□□□□ -1.52
SOX1O00570 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SOX1O00570 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SOX1O00570 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.57□□□□□ -1.52
SOX1O00570 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SOX1O00570 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.57□□□□□ -1.52
SOX1O00570 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SOX1O00570 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SOX1O00570 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
SOX1O00570 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SOX1O00570 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.57□□□□□ -1.52
SOX1O00570 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.57□□□□□ -1.52
SOX1O00570 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SOX1O00570 RNU6-641P-201ENST00000384006 107 ntBASIC5.57□□□□□ -1.52
SOX1O00570 MIR129-1-201ENST00000384972 72 ntBASIC5.57□□□□□ -1.52
SOX1O00570 RNU6-278P-201ENST00000390945 109 ntBASIC5.57□□□□□ -1.52
SOX1O00570 MIR1302-3-201ENST00000408128 138 ntBASIC5.57□□□□□ -1.52
SOX1O00570 MIR548F4-201ENST00000408515 105 ntBASIC5.57□□□□□ -1.52
SOX1O00570 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.57□□□□□ -1.52
SOX1O00570 RPS12P24-201ENST00000412619 387 ntBASIC5.57□□□□□ -1.52
SOX1O00570 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.57□□□□□ -1.52
SOX1O00570 AL139396.1-201ENST00000421137 167 ntBASIC5.57□□□□□ -1.52
SOX1O00570 COX6CP15-201ENST00000426313 211 ntBASIC5.57□□□□□ -1.52
SOX1O00570 OR2AS1P-201ENST00000427827 319 ntBASIC5.57□□□□□ -1.52
SOX1O00570 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.57□□□□□ -1.52
SOX1O00570 AF228730.2-201ENST00000438784 848 ntBASIC5.57□□□□□ -1.52
SOX1O00570 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.57□□□□□ -1.52
SOX1O00570 MED28P3-201ENST00000444288 531 ntBASIC5.57□□□□□ -1.52
SOX1O00570 AC104073.1-201ENST00000451988 151 ntBASIC5.57□□□□□ -1.52
SOX1O00570 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.57□□□□□ -1.52
SOX1O00570 AC104308.1-201ENST00000454621 333 ntBASIC5.57□□□□□ -1.52
SOX1O00570 RPL30P15-201ENST00000457129 321 ntBASIC5.57□□□□□ -1.52
SOX1O00570 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.57□□□□□ -1.52
SOX1O00570 Y_RNA.654-201ENST00000497848 106 ntBASIC5.57□□□□□ -1.52
SOX1O00570 AC093840.1-201ENST00000511599 336 ntBASIC5.57□□□□□ -1.52
SOX1O00570 RNU6-1038P-201ENST00000516516 104 ntBASIC5.57□□□□□ -1.52
SOX1O00570 RNU7-51P-201ENST00000516560 62 ntBASIC5.57□□□□□ -1.52
SOX1O00570 RN7SKP295-201ENST00000517264 153 ntBASIC5.57□□□□□ -1.52
SOX1O00570 AC012400.1-201ENST00000518452 381 ntBASIC5.57□□□□□ -1.52
SOX1O00570 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.57□□□□□ -1.52
SOX1O00570 AC024224.1-201ENST00000538284 609 ntBASIC5.57□□□□□ -1.52
SOX1O00570 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.57□□□□□ -1.52
SOX1O00570 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.57□□□□□ -1.52
SOX1O00570 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.57□□□□□ -1.52
SOX1O00570 MIR4504-201ENST00000577413 92 ntBASIC5.57□□□□□ -1.52
SOX1O00570 MIR4703-201ENST00000577728 79 ntBASIC5.57□□□□□ -1.52
SOX1O00570 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.57□□□□□ -1.52
SOX1O00570 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SOX1O00570 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.57□□□□□ -1.52
SOX1O00570 AC022893.3-201ENST00000607665 437 ntBASIC5.57□□□□□ -1.52
SOX1O00570 AL031666.3-201ENST00000609320 1006 ntBASIC5.57□□□□□ -1.52
SOX1O00570 AC083806.3-201ENST00000614016 455 ntBASIC5.57□□□□□ -1.52
SOX1O00570 AC133104.2-201ENST00000615272 193 ntBASIC5.57□□□□□ -1.52
SOX1O00570 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.57□□□□□ -1.52
SOX1O00570 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.57□□□□□ -1.52
SOX1O00570 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SOX1O00570 MTND5P19-201ENST00000424872 1794 ntBASIC5.57□□□□□ -1.52
SOX1O00570 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.57□□□□□ -1.52
SOX1O00570 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.57□□□□□ -1.52
SOX1O00570 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SOX1O00570 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SOX1O00570 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.57□□□□□ -1.52
SOX1O00570 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SOX1O00570 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SOX1O00570 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
SOX1O00570 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SOX1O00570 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SOX1O00570 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SOX1O00570 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
SOX1O00570 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SOX1O00570 AL592148.3-201ENST00000608771 2646 ntBASIC5.56□□□□□ -1.52
SOX1O00570 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.56□□□□□ -1.52
SOX1O00570 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SOX1O00570 AC244517.1-201ENST00000606030 2086 ntBASIC5.56□□□□□ -1.52
SOX1O00570 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.56□□□□□ -1.52
SOX1O00570 Y_RNA.148-201ENST00000363557 117 ntBASIC5.56□□□□□ -1.52
SOX1O00570 Y_RNA.158-201ENST00000363651 101 ntBASIC5.56□□□□□ -1.52
SOX1O00570 Y_RNA.378-201ENST00000365652 113 ntBASIC5.56□□□□□ -1.52
SOX1O00570 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.56□□□□□ -1.52
SOX1O00570 RNU6-505P-201ENST00000384427 107 ntBASIC5.56□□□□□ -1.52
SOX1O00570 MIR19A-201ENST00000384878 82 ntBASIC5.56□□□□□ -1.52
SOX1O00570 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SOX1O00570 HMGN1P24-201ENST00000412282 298 ntBASIC5.56□□□□□ -1.52
SOX1O00570 AC114482.1-201ENST00000418010 247 ntBASIC5.56□□□□□ -1.52
SOX1O00570 RPL31P12-201ENST00000422587 358 ntBASIC5.56□□□□□ -1.52
SOX1O00570 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.56□□□□□ -1.52
SOX1O00570 CBX3P6-201ENST00000430257 527 ntBASIC5.56□□□□□ -1.52
SOX1O00570 FTH1P1-201ENST00000437933 532 ntBASIC5.56□□□□□ -1.52
SOX1O00570 AL035666.1-201ENST00000446195 348 ntBASIC5.56□□□□□ -1.52
SOX1O00570 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.56□□□□□ -1.52
SOX1O00570 OR1H1P-201ENST00000448731 937 ntBASIC5.56□□□□□ -1.52
SOX1O00570 AC079168.1-201ENST00000458741 345 ntBASIC5.56□□□□□ -1.52
SOX1O00570 AC079804.1-201ENST00000461922 436 ntBASIC5.56□□□□□ -1.52
SOX1O00570 AC092754.1-201ENST00000472975 479 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms