Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 DEFA7P-201ENST00000382676 285 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 SNORA18.3-201ENST00000384122 132 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 SNORA44-201ENST00000384584 132 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.24□□□□□ -2.05
SDCBPO00560 RPL21P75-201ENST00000396599 483 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 RPL21P28-201ENST00000401418 483 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 AL592114.1-201ENST00000403842 483 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 RPS20P25-201ENST00000412447 352 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 AL096701.2-201ENST00000416920 238 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.24□□□□□ -2.05
SDCBPO00560 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.24□□□□□ -2.05
SDCBPO00560 RPS24P13-201ENST00000442520 397 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 HMGB1P48-201ENST00000446155 598 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 CACYBPP2-201ENST00000453625 678 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SDCBPO00560 RPL21P39-201ENST00000463605 483 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 S100A11P2-201ENST00000467589 312 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 AC011979.1-201ENST00000472300 483 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 RPL21P93-201ENST00000480465 489 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 AC233702.1-201ENST00000482905 502 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 AC087190.1-201ENST00000484462 480 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SDCBPO00560 AC093591.1-201ENST00000491435 481 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 RPL21P16-201ENST00000495531 483 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.24□□□□□ -2.05
SDCBPO00560 KLHL2P1-201ENST00000508691 521 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.24□□□□□ -2.05
SDCBPO00560 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.24□□□□□ -2.05
SDCBPO00560 HIGD1AP13-201ENST00000509878 289 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.24□□□□□ -2.05
SDCBPO00560 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.24□□□□□ -2.05
SDCBPO00560 AC100870.1-201ENST00000522035 505 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 HAUS1P3-201ENST00000523909 662 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 AC109635.4-202ENST00000531666 412 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 POLR2KP1-201ENST00000553226 168 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 GTF2IP8-201ENST00000560687 584 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 AL160237.3-201ENST00000604114 1013 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SDCBPO00560 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SDCBPO00560 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.23□□□□□ -2.05
SDCBPO00560 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.23□□□□□ -2.05
SDCBPO00560 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.23□□□□□ -2.05
SDCBPO00560 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.23□□□□□ -2.05
SDCBPO00560 MAPK10-266ENST00000641066 6555 ntBASIC2.23□□□□□ -2.05
SDCBPO00560 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.23□□□□□ -2.05
SDCBPO00560 MIR491-201ENST00000384877 84 ntBASIC2.23□□□□□ -2.05
SDCBPO00560 AL138827.1-201ENST00000402666 306 ntBASIC2.23□□□□□ -2.05
SDCBPO00560 MIR1303-201ENST00000408625 86 ntBASIC2.23□□□□□ -2.05
SDCBPO00560 AC109780.2-201ENST00000413467 845 ntBASIC2.23□□□□□ -2.05
SDCBPO00560 AL592148.1-201ENST00000413568 445 ntBASIC2.23□□□□□ -2.05
SDCBPO00560 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.23□□□□□ -2.05
SDCBPO00560 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.23□□□□□ -2.05
SDCBPO00560 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.23□□□□□ -2.05
SDCBPO00560 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.23□□□□□ -2.05
SDCBPO00560 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SDCBPO00560 AL024509.2-201ENST00000493462 493 ntBASIC2.23□□□□□ -2.05
SDCBPO00560 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.23□□□□□ -2.05
SDCBPO00560 SNORA31.21-201ENST00000517180 77 ntBASIC2.23□□□□□ -2.05
SDCBPO00560 AC090136.1-201ENST00000520009 240 ntBASIC2.23□□□□□ -2.05
SDCBPO00560 AC104115.2-201ENST00000523026 687 ntBASIC2.23□□□□□ -2.05
SDCBPO00560 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.23□□□□□ -2.05
SDCBPO00560 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.23□□□□□ -2.05
SDCBPO00560 AC090751.1-201ENST00000566966 267 ntBASIC2.23□□□□□ -2.05
SDCBPO00560 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.23□□□□□ -2.05
SDCBPO00560 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.23□□□□□ -2.05
SDCBPO00560 AC060766.3-201ENST00000591442 263 ntBASIC2.23□□□□□ -2.05
SDCBPO00560 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.23□□□□□ -2.05
SDCBPO00560 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SDCBPO00560 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SDCBPO00560 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.23□□□□□ -2.05
SDCBPO00560 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SDCBPO00560 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SDCBPO00560 RNA5SP387-201ENST00000364226 106 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 RNU4-31P-201ENST00000384211 141 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.22□□□□□ -2.05
SDCBPO00560 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.22□□□□□ -2.05
SDCBPO00560 YPEL5P1-201ENST00000419731 367 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 AL135938.1-201ENST00000443141 297 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 snoU13.24-201ENST00000458998 104 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.22□□□□□ -2.05
SDCBPO00560 KC877373.1-201ENST00000479066 408 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 MTCO3P35-201ENST00000485582 781 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.22□□□□□ -2.05
SDCBPO00560 HMGB1P47-201ENST00000511281 589 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.22□□□□□ -2.05
SDCBPO00560 MTND5P4-201ENST00000514978 288 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 AC008562.1-201ENST00000521763 330 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 AP004371.1-201ENST00000525240 214 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 AC004923.2-201ENST00000529649 369 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 AC139103.1-201ENST00000534696 1030 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 AC123904.3-201ENST00000547218 814 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 CR383656.14-201ENST00000551951 406 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 CYCSP39-201ENST00000565821 309 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.22□□□□□ -2.05
SDCBPO00560 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.22□□□□□ -2.05
SDCBPO00560 AL451007.1-201ENST00000595491 289 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.22□□□□□ -2.05
SDCBPO00560 AL590282.1-201ENST00000610379 1136 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms