Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CACNA1AO00555 Y_RNA.274-201ENST00000364714 101 ntBASIC2.39□□□□□ -2.03
CACNA1AO00555 RNA5SP31-201ENST00000411144 127 ntBASIC2.39□□□□□ -2.03
CACNA1AO00555 YPEL5P1-201ENST00000419731 367 ntBASIC2.39□□□□□ -2.03
CACNA1AO00555 AC126121.1-201ENST00000482313 553 ntBASIC2.39□□□□□ -2.03
CACNA1AO00555 RNA5SP102-201ENST00000516865 106 ntBASIC2.39□□□□□ -2.03
CACNA1AO00555 OR5AK3P-201ENST00000527486 1297 ntBASIC2.39□□□□□ -2.03
CACNA1AO00555 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.39□□□□□ -2.03
CACNA1AO00555 HPRT1P3-201ENST00000539521 576 ntBASIC2.39□□□□□ -2.03
CACNA1AO00555 AC011611.5-201ENST00000552477 578 ntBASIC2.39□□□□□ -2.03
CACNA1AO00555 AC007424.1-203ENST00000554613 687 ntBASIC2.39□□□□□ -2.03
CACNA1AO00555 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CACNA1AO00555 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC2.39□□□□□ -2.03
CACNA1AO00555 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CACNA1AO00555 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CACNA1AO00555 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CACNA1AO00555 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CACNA1AO00555 RNU4-41P-201ENST00000364426 143 ntBASIC2.38□□□□□ -2.03
CACNA1AO00555 USP9YP33-201ENST00000412220 421 ntBASIC2.38□□□□□ -2.03
CACNA1AO00555 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.38□□□□□ -2.03
CACNA1AO00555 AC104332.2-201ENST00000429959 156 ntBASIC2.38□□□□□ -2.03
CACNA1AO00555 OR4K11P-201ENST00000431829 904 ntBASIC2.38□□□□□ -2.03
CACNA1AO00555 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.38□□□□□ -2.03
CACNA1AO00555 USP9YP35-201ENST00000435696 412 ntBASIC2.38□□□□□ -2.03
CACNA1AO00555 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.38□□□□□ -2.03
CACNA1AO00555 PPP1R2P5-201ENST00000457256 603 ntBASIC2.38□□□□□ -2.03
CACNA1AO00555 AC036111.3-201ENST00000526389 112 ntBASIC2.38□□□□□ -2.03
CACNA1AO00555 AC008277.2-201ENST00000605196 797 ntBASIC2.38□□□□□ -2.03
CACNA1AO00555 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CACNA1AO00555 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC2.38□□□□□ -2.03
CACNA1AO00555 SNORD114-22-201ENST00000365423 72 ntBASIC2.38□□□□□ -2.03
CACNA1AO00555 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CACNA1AO00555 AP002088.1-201ENST00000382740 395 ntBASIC2.38□□□□□ -2.03
CACNA1AO00555 RNU6-55P-201ENST00000411092 107 ntBASIC2.38□□□□□ -2.03
CACNA1AO00555 RNU6-954P-201ENST00000411355 107 ntBASIC2.38□□□□□ -2.03
CACNA1AO00555 RPL30P3-201ENST00000424262 333 ntBASIC2.38□□□□□ -2.03
CACNA1AO00555 AC018634.1-201ENST00000437554 401 ntBASIC2.38□□□□□ -2.03
CACNA1AO00555 RN7SL93P-201ENST00000463035 293 ntBASIC2.38□□□□□ -2.03
CACNA1AO00555 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
CACNA1AO00555 ATP5EP1-201ENST00000510257 156 ntBASIC2.38□□□□□ -2.03
CACNA1AO00555 RNU6-513P-201ENST00000516104 104 ntBASIC2.38□□□□□ -2.03
CACNA1AO00555 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC2.38□□□□□ -2.03
CACNA1AO00555 AP000919.1-202ENST00000581139 1264 ntBASIC2.38□□□□□ -2.03
CACNA1AO00555 AC103710.2-201ENST00000609912 942 ntBASIC2.38□□□□□ -2.03
CACNA1AO00555 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CACNA1AO00555 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CACNA1AO00555 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
CACNA1AO00555 OR52B1P-201ENST00000316506 909 ntBASIC2.37□□□□□ -2.03
CACNA1AO00555 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.37□□□□□ -2.03
CACNA1AO00555 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.37□□□□□ -2.03
CACNA1AO00555 RPL23AP35-201ENST00000451906 501 ntBASIC2.37□□□□□ -2.03
CACNA1AO00555 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC2.37□□□□□ -2.03
CACNA1AO00555 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.37□□□□□ -2.03
CACNA1AO00555 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.37□□□□□ -2.03
CACNA1AO00555 IGKV2D-36-201ENST00000518643 226 ntBASIC2.37□□□□□ -2.03
CACNA1AO00555 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.37□□□□□ -2.03
CACNA1AO00555 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.37□□□□□ -2.03
CACNA1AO00555 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.37□□□□□ -2.03
CACNA1AO00555 AC007620.3-201ENST00000608131 497 ntBASIC2.37□□□□□ -2.03
CACNA1AO00555 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CACNA1AO00555 AC017007.4-201ENST00000503353 1352 ntBASIC2.37□□□□□ -2.03
CACNA1AO00555 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
CACNA1AO00555 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CACNA1AO00555 U8.10-201ENST00000384260 133 ntBASIC2.37□□□□□ -2.03
CACNA1AO00555 MIR93-201ENST00000385024 80 ntBASIC2.37□□□□□ -2.03
CACNA1AO00555 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.37□□□□□ -2.03
CACNA1AO00555 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.37□□□□□ -2.03
CACNA1AO00555 KATNBL1P3-201ENST00000443475 909 ntBASIC2.37□□□□□ -2.03
CACNA1AO00555 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.37□□□□□ -2.03
CACNA1AO00555 RNU1-123P-201ENST00000458950 160 ntBASIC2.37□□□□□ -2.03
CACNA1AO00555 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.37□□□□□ -2.03
CACNA1AO00555 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.37□□□□□ -2.03
CACNA1AO00555 AC114786.4-201ENST00000508771 728 ntBASIC2.37□□□□□ -2.03
CACNA1AO00555 AC114797.1-201ENST00000514003 728 ntBASIC2.37□□□□□ -2.03
CACNA1AO00555 MIR2276-201ENST00000516886 89 ntBASIC2.37□□□□□ -2.03
CACNA1AO00555 AC087854.1-201ENST00000519706 414 ntBASIC2.37□□□□□ -2.03
CACNA1AO00555 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2.37□□□□□ -2.03
CACNA1AO00555 MYL12BP1-201ENST00000569826 507 ntBASIC2.37□□□□□ -2.03
CACNA1AO00555 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.37□□□□□ -2.03
CACNA1AO00555 AC019159.1-201ENST00000605094 187 ntBASIC2.37□□□□□ -2.03
CACNA1AO00555 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.37□□□□□ -2.03
CACNA1AO00555 MTND5P28-201ENST00000438005 1594 ntBASIC2.37□□□□□ -2.03
CACNA1AO00555 AC018555.1-201ENST00000567548 1980 ntBASIC2.37□□□□□ -2.03
CACNA1AO00555 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
CACNA1AO00555 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CACNA1AO00555 Y_RNA.327-201ENST00000365201 102 ntBASIC2.36□□□□□ -2.03
CACNA1AO00555 RNY1P4-201ENST00000384595 115 ntBASIC2.36□□□□□ -2.03
CACNA1AO00555 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC2.36□□□□□ -2.03
CACNA1AO00555 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.36□□□□□ -2.03
CACNA1AO00555 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.36□□□□□ -2.03
CACNA1AO00555 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.36□□□□□ -2.03
CACNA1AO00555 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC2.36□□□□□ -2.03
CACNA1AO00555 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CACNA1AO00555 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CACNA1AO00555 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CACNA1AO00555 AC022336.2-201ENST00000568966 2538 ntBASIC2.36□□□□□ -2.03
CACNA1AO00555 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.36□□□□□ -2.03
CACNA1AO00555 AL445183.3-201ENST00000414168 502 ntBASIC2.36□□□□□ -2.03
CACNA1AO00555 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.36□□□□□ -2.03
CACNA1AO00555 AC011816.1-201ENST00000441346 546 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms