Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 EEF1B2P4-201ENST00000551398 348 ntBASIC4.52□□□□□ -1.69
FOXN3O00409 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXN3O00409 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXN3O00409 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXN3O00409 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXN3O00409 TPMTP1-201ENST00000592307 737 ntBASIC4.52□□□□□ -1.69
FOXN3O00409 AC025946.2-201ENST00000603398 234 ntBASIC4.52□□□□□ -1.69
FOXN3O00409 AC004853.1-201ENST00000604902 698 ntBASIC4.52□□□□□ -1.69
FOXN3O00409 BCRP9-201ENST00000605312 388 ntBASIC4.52□□□□□ -1.69
FOXN3O00409 AP000254.1-201ENST00000609934 520 ntBASIC4.52□□□□□ -1.69
FOXN3O00409 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXN3O00409 AC099842.1-201ENST00000619919 596 ntBASIC4.52□□□□□ -1.69
FOXN3O00409 AC008785.1-201ENST00000624475 456 ntBASIC4.52□□□□□ -1.69
FOXN3O00409 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXN3O00409 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.52□□□□□ -1.69
FOXN3O00409 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXN3O00409 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.52□□□□□ -1.69
FOXN3O00409 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.52□□□□□ -1.69
FOXN3O00409 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXN3O00409 AL049780.3-201ENST00000624612 1583 ntBASIC4.52□□□□□ -1.69
FOXN3O00409 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
FOXN3O00409 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
FOXN3O00409 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
FOXN3O00409 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.51□□□□□ -1.69
FOXN3O00409 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.51□□□□□ -1.69
FOXN3O00409 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.51□□□□□ -1.69
FOXN3O00409 AC011276.1-201ENST00000469688 323 ntBASIC4.51□□□□□ -1.69
FOXN3O00409 RPL35P6-201ENST00000490024 372 ntBASIC4.51□□□□□ -1.69
FOXN3O00409 AC034222.1-201ENST00000494052 532 ntBASIC4.51□□□□□ -1.69
FOXN3O00409 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.51□□□□□ -1.69
FOXN3O00409 AL592156.1-201ENST00000508758 304 ntBASIC4.51□□□□□ -1.69
FOXN3O00409 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.51□□□□□ -1.69
FOXN3O00409 AC008958.1-201ENST00000511047 682 ntBASIC4.51□□□□□ -1.69
FOXN3O00409 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.51□□□□□ -1.69
FOXN3O00409 MTND3P5-201ENST00000512798 333 ntBASIC4.51□□□□□ -1.69
FOXN3O00409 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.51□□□□□ -1.69
FOXN3O00409 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
FOXN3O00409 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.51□□□□□ -1.69
FOXN3O00409 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.51□□□□□ -1.69
FOXN3O00409 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
FOXN3O00409 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.51□□□□□ -1.69
FOXN3O00409 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.51□□□□□ -1.69
FOXN3O00409 AC007599.1-201ENST00000568688 1174 ntBASIC4.51□□□□□ -1.69
FOXN3O00409 AC034268.2-201ENST00000571784 482 ntBASIC4.51□□□□□ -1.69
FOXN3O00409 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.51□□□□□ -1.69
FOXN3O00409 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.51□□□□□ -1.69
FOXN3O00409 IGHV3-29-201ENST00000604817 344 ntBASIC4.51□□□□□ -1.69
FOXN3O00409 AL356218.2-201ENST00000605264 187 ntBASIC4.51□□□□□ -1.69
FOXN3O00409 AC104073.3-201ENST00000610942 955 ntBASIC4.51□□□□□ -1.69
FOXN3O00409 FAM27D1-201ENST00000612308 341 ntBASIC4.51□□□□□ -1.69
FOXN3O00409 AC025594.3-201ENST00000613068 790 ntBASIC4.51□□□□□ -1.69
FOXN3O00409 AC010678.1-201ENST00000614118 713 ntBASIC4.51□□□□□ -1.69
FOXN3O00409 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.51□□□□□ -1.69
FOXN3O00409 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.51□□□□□ -1.69
FOXN3O00409 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
FOXN3O00409 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
FOXN3O00409 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
FOXN3O00409 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
FOXN3O00409 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
FOXN3O00409 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.51□□□□□ -1.69
FOXN3O00409 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
FOXN3O00409 AP002001.2-201ENST00000529025 1469 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXN3O00409 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
FOXN3O00409 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXN3O00409 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.5□□□□□ -1.69
FOXN3O00409 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXN3O00409 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
FOXN3O00409 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXN3O00409 RNA5SP167-201ENST00000365461 116 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 MIR1179-201ENST00000408703 91 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 RNU2-47P-201ENST00000410649 186 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXN3O00409 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.5□□□□□ -1.69
FOXN3O00409 RPL22P17-201ENST00000438729 315 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 CBX1P1-201ENST00000440184 427 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 FAM103A2P-201ENST00000444122 354 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 AL590365.1-201ENST00000450788 243 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXN3O00409 HMGB3P30-201ENST00000457863 606 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 AP000873.1-201ENST00000463987 400 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 AC109327.1-201ENST00000471666 403 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 AC006517.1-201ENST00000480485 328 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.5□□□□□ -1.69
FOXN3O00409 PARP4P3-201ENST00000510265 317 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
FOXN3O00409 AC022447.1-201ENST00000515358 464 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
FOXN3O00409 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.5□□□□□ -1.69
FOXN3O00409 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.5□□□□□ -1.69
FOXN3O00409 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXN3O00409 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXN3O00409 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXN3O00409 AC063950.1-201ENST00000552036 308 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXN3O00409 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXN3O00409 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXN3O00409 MIR4330-201ENST00000579077 105 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 AL049634.3-201ENST00000604968 457 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms