Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.3□□□□□ -1.88
AP3B1O00203 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.3□□□□□ -1.88
AP3B1O00203 AL359073.1-201ENST00000448036 403 ntBASIC3.3□□□□□ -1.88
AP3B1O00203 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.3□□□□□ -1.88
AP3B1O00203 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.3□□□□□ -1.88
AP3B1O00203 AC006499.5-201ENST00000505037 514 ntBASIC3.3□□□□□ -1.88
AP3B1O00203 AC110794.1-201ENST00000505816 425 ntBASIC3.3□□□□□ -1.88
AP3B1O00203 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.3□□□□□ -1.88
AP3B1O00203 RNU1-45P-201ENST00000517191 141 ntBASIC3.3□□□□□ -1.88
AP3B1O00203 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.3□□□□□ -1.88
AP3B1O00203 OR8I1P-201ENST00000529291 931 ntBASIC3.3□□□□□ -1.88
AP3B1O00203 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
AP3B1O00203 HIGD1AP1-201ENST00000550979 275 ntBASIC3.3□□□□□ -1.88
AP3B1O00203 MIR4506-201ENST00000584693 77 ntBASIC3.3□□□□□ -1.88
AP3B1O00203 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.3□□□□□ -1.88
AP3B1O00203 AC245036.5-201ENST00000596330 847 ntBASIC3.3□□□□□ -1.88
AP3B1O00203 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.3□□□□□ -1.88
AP3B1O00203 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.3□□□□□ -1.88
AP3B1O00203 AC239803.2-201ENST00000610161 430 ntBASIC3.3□□□□□ -1.88
AP3B1O00203 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.3□□□□□ -1.88
AP3B1O00203 AL731566.2-201ENST00000618971 317 ntBASIC3.3□□□□□ -1.88
AP3B1O00203 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.3□□□□□ -1.88
AP3B1O00203 AL356863.1-201ENST00000623378 1080 ntBASIC3.3□□□□□ -1.88
AP3B1O00203 AC011460.1-201ENST00000636268 1834 ntBASIC3.3□□□□□ -1.88
AP3B1O00203 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
AP3B1O00203 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
AP3B1O00203 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.29□□□□□ -1.88
AP3B1O00203 OR6K3-202ENST00000368146 996 ntBASIC3.29□□□□□ -1.88
AP3B1O00203 MIR200C-201ENST00000384980 68 ntBASIC3.29□□□□□ -1.88
AP3B1O00203 PTMAP2-201ENST00000397627 327 ntBASIC3.29□□□□□ -1.88
AP3B1O00203 MTCO2P31-201ENST00000402702 684 ntBASIC3.29□□□□□ -1.88
AP3B1O00203 MTND3P20-201ENST00000407663 186 ntBASIC3.29□□□□□ -1.88
AP3B1O00203 RNA5SP229-201ENST00000410809 99 ntBASIC3.29□□□□□ -1.88
AP3B1O00203 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.29□□□□□ -1.88
AP3B1O00203 FTH1P1-201ENST00000437933 532 ntBASIC3.29□□□□□ -1.88
AP3B1O00203 CDC42P1-201ENST00000456658 548 ntBASIC3.29□□□□□ -1.88
AP3B1O00203 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.29□□□□□ -1.88
AP3B1O00203 PLGLA-201ENST00000465668 449 ntBASIC3.29□□□□□ -1.88
AP3B1O00203 AC020898.1-201ENST00000474167 787 ntBASIC3.29□□□□□ -1.88
AP3B1O00203 RPS26P21-201ENST00000475397 348 ntBASIC3.29□□□□□ -1.88
AP3B1O00203 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.29□□□□□ -1.88
AP3B1O00203 AC053481.3-201ENST00000577881 843 ntBASIC3.29□□□□□ -1.88
AP3B1O00203 AC006130.2-201ENST00000586202 326 ntBASIC3.29□□□□□ -1.88
AP3B1O00203 AC012669.1-201ENST00000603209 283 ntBASIC3.29□□□□□ -1.88
AP3B1O00203 AC020658.4-201ENST00000613987 684 ntBASIC3.29□□□□□ -1.88
AP3B1O00203 AC039056.2-201ENST00000622261 511 ntBASIC3.29□□□□□ -1.88
AP3B1O00203 AC091903.1-201ENST00000624322 454 ntBASIC3.29□□□□□ -1.88
AP3B1O00203 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.29□□□□□ -1.88
AP3B1O00203 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.29□□□□□ -1.88
AP3B1O00203 AC012442.3-202ENST00000636742 206 ntBASIC3.29□□□□□ -1.88
AP3B1O00203 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
AP3B1O00203 AC091564.4-201ENST00000533934 2194 ntBASIC3.29□□□□□ -1.88
AP3B1O00203 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
AP3B1O00203 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
AP3B1O00203 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.29□□□□□ -1.88
AP3B1O00203 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
AP3B1O00203 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.28□□□□□ -1.88
AP3B1O00203 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.28□□□□□ -1.88
AP3B1O00203 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
AP3B1O00203 MIR16-2-201ENST00000362117 81 ntBASIC3.28□□□□□ -1.88
AP3B1O00203 RNU1-70P-201ENST00000362618 164 ntBASIC3.28□□□□□ -1.88
AP3B1O00203 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
AP3B1O00203 U3.29-201ENST00000391296 212 ntBASIC3.28□□□□□ -1.88
AP3B1O00203 TAF9BP1-201ENST00000396646 746 ntBASIC3.28□□□□□ -1.88
AP3B1O00203 RNU4-27P-201ENST00000410889 139 ntBASIC3.28□□□□□ -1.88
AP3B1O00203 HMGN1P24-201ENST00000412282 298 ntBASIC3.28□□□□□ -1.88
AP3B1O00203 AL158050.1-201ENST00000416077 457 ntBASIC3.28□□□□□ -1.88
AP3B1O00203 AC246680.2-201ENST00000422106 389 ntBASIC3.28□□□□□ -1.88
AP3B1O00203 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.28□□□□□ -1.88
AP3B1O00203 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.28□□□□□ -1.88
AP3B1O00203 OR2AS1P-201ENST00000427827 319 ntBASIC3.28□□□□□ -1.88
AP3B1O00203 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.28□□□□□ -1.88
AP3B1O00203 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.28□□□□□ -1.88
AP3B1O00203 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.28□□□□□ -1.88
AP3B1O00203 AC004866.2-201ENST00000438285 481 ntBASIC3.28□□□□□ -1.88
AP3B1O00203 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
AP3B1O00203 AL096803.2-201ENST00000450032 677 ntBASIC3.28□□□□□ -1.88
AP3B1O00203 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.28□□□□□ -1.88
AP3B1O00203 RN7SL283P-201ENST00000489055 303 ntBASIC3.28□□□□□ -1.88
AP3B1O00203 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.28□□□□□ -1.88
AP3B1O00203 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.28□□□□□ -1.88
AP3B1O00203 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.28□□□□□ -1.88
AP3B1O00203 AC048346.1-201ENST00000510247 144 ntBASIC3.28□□□□□ -1.88
AP3B1O00203 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.28□□□□□ -1.88
AP3B1O00203 AC068657.1-201ENST00000520807 306 ntBASIC3.28□□□□□ -1.88
AP3B1O00203 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.28□□□□□ -1.88
AP3B1O00203 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.28□□□□□ -1.88
AP3B1O00203 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
AP3B1O00203 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.28□□□□□ -1.88
AP3B1O00203 AC034268.2-201ENST00000571784 482 ntBASIC3.28□□□□□ -1.88
AP3B1O00203 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.28□□□□□ -1.88
AP3B1O00203 AL590396.4-201ENST00000636779 956 ntBASIC3.28□□□□□ -1.88
AP3B1O00203 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
AP3B1O00203 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.28□□□□□ -1.88
AP3B1O00203 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
AP3B1O00203 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
AP3B1O00203 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
AP3B1O00203 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
AP3B1O00203 GDI2P1-201ENST00000429312 1336 ntBASIC3.27□□□□□ -1.89
AP3B1O00203 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms