Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 ARF4P2-201ENST00000430209 526 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 USP9YP22-201ENST00000438971 294 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 CYCSP32-201ENST00000440548 321 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 AC005410.1-202ENST00000460347 485 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 AC017015.1-201ENST00000477387 286 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 RPL21P103-201ENST00000479921 488 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 RPS3AP50-201ENST00000487064 803 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 HIGD1AP3-201ENST00000515857 278 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 PDCL2P2-201ENST00000533651 189 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 ZNF415P1-201ENST00000582279 1166 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 AL606834.2-201ENST00000602954 668 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 AL160281.1-201ENST00000605307 311 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 Z83843.1-201ENST00000604070 3685 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 CR381670.1-201ENST00000624291 1693 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 RNU4-92P-201ENST00000363783 136 ntBASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 AL391417.1-201ENST00000404100 426 ntBASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 Z99755.1-201ENST00000414048 380 ntBASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 AC096632.1-201ENST00000427395 310 ntBASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 RFC5P1-201ENST00000454419 874 ntBASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 PNPLA4P1-201ENST00000458328 305 ntBASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 RPL7P38-201ENST00000488396 739 ntBASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 DSTNP2-201ENST00000504533 515 ntBASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 AC020699.1-201ENST00000505161 445 ntBASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 TMEM248P1-201ENST00000510579 951 ntBASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 AC008837.2-201ENST00000513076 418 ntBASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 AP006245.1-201ENST00000522549 120 ntBASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 AL389895.1-201ENST00000554127 252 ntBASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 BNIP3P38-201ENST00000601117 544 ntBASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 AC091946.2-201ENST00000606105 291 ntBASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 AC034229.4-201ENST00000607861 441 ntBASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 MKKS-204ENST00000639674 192 ntBASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 Z99496.1-201ENST00000469424 1477 ntBASIC3.47□□□□□ -1.85
NEDD8-MDP1E9PL57 AL359893.1-201ENST00000447628 1580 ntBASIC3.46□□□□□ -1.85
NEDD8-MDP1E9PL57 DCAF13P1-201ENST00000495256 1330 ntBASIC3.46□□□□□ -1.85
NEDD8-MDP1E9PL57 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 AC099786.3-201ENST00000565735 1410 ntBASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 AL356274.2-201ENST00000624379 3752 ntBASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 RNU6-413P-201ENST00000384115 107 ntBASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 AC092832.1-201ENST00000422934 400 ntBASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 GTF2IP23-201ENST00000423746 351 ntBASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 AL357552.1-201ENST00000445254 415 ntBASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 RPL21P13-201ENST00000488305 481 ntBASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 AC021678.1-201ENST00000505195 936 ntBASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 RNU6-1261P-201ENST00000517194 104 ntBASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 MTCYBP27-201ENST00000555160 670 ntBASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 GTF2IP8-201ENST00000560687 584 ntBASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 MIR5680-201ENST00000577577 84 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms