Protein–RNA interactions for Protein: B2RUZ4

SMIM1, Small integral membrane protein 1, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1B2RUZ4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 CIR1P3-201ENST00000405137 479 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 RNA5SP178-201ENST00000410380 128 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AL160275.2-201ENST00000412010 394 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 HMGB3P20-201ENST00000417997 600 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC009480.2-201ENST00000422916 432 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 TIMM9P3-201ENST00000428659 274 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 MTATP6P23-201ENST00000440153 476 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC069285.2-201ENST00000440210 275 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 PPIAP3-201ENST00000450588 505 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC027673.1-201ENST00000456245 405 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 UBDP1-202ENST00000457888 382 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 RN7SL649P-201ENST00000496974 275 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC091868.1-201ENST00000508746 304 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 SSX6-203ENST00000509958 336 ntTSL 3 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 FTH1P21-201ENST00000512179 511 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC015795.1-201ENST00000513669 327 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC010342.1-201ENST00000514047 877 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 RNU6-1095P-201ENST00000516148 108 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 RNU6-1178P-201ENST00000516674 107 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 Y_RNA.704-201ENST00000516851 102 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC090572.1-201ENST00000519251 160 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 OR5AQ1P-201ENST00000527596 927 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC105233.3-201ENST00000531125 744 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC069240.1-201ENST00000548774 375 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 RPS3AP4-201ENST00000555161 764 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 SUB1P2-201ENST00000556401 297 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AL133153.1-201ENST00000557756 303 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 HMGB3P26-201ENST00000560051 582 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 HMGB1P33-201ENST00000563485 527 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 COX6CP3-201ENST00000580869 223 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC020910.3-201ENST00000603701 874 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC067959.1-201ENST00000604334 379 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AL031176.1-201ENST00000604554 466 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 IGHV3-29-201ENST00000604817 344 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AL109618.2-201ENST00000605527 211 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AP001596.2-201ENST00000608410 312 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC103710.2-201ENST00000609912 942 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC007497.1-201ENST00000610421 561 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AC015813.4-201ENST00000610469 179 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
SMIM1B2RUZ4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 DHX40P1-201ENST00000588725 1412 ntBASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 MIR448-201ENST00000362131 111 ntBASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 Y_RNA.9-201ENST00000362354 101 ntBASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 RNY4P14-201ENST00000363656 96 ntBASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 RNU1-63P-201ENST00000383902 164 ntBASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 Y_RNA.390-201ENST00000383932 102 ntBASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 MIR135A2-201ENST00000384854 100 ntBASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 AC068050.1-201ENST00000394891 380 ntBASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 U3.36-201ENST00000408418 213 ntBASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 HMGN1P24-201ENST00000412282 298 ntBASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 ELOCP4-201ENST00000420090 333 ntBASIC3.11□□□□□ -1.91
SMIM1B2RUZ4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms