Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 HSFY3P-201ENST00000444242 1191 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 AP000936.2-201ENST00000447151 681 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 AP002371.1-201ENST00000463604 433 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 AC006445.2-201ENST00000510061 472 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 XKRY-201ENST00000510392 1100 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 RNU1-61P-201ENST00000516107 151 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 RNA5SP367-201ENST00000516557 118 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 AC105137.2-201ENST00000569073 466 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 AC090616.5-202ENST00000582111 297 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 AC008739.3-201ENST00000603262 127 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 AC113194.1-201ENST00000606037 500 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 AL159169.3-201ENST00000608871 561 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 MIR6766-201ENST00000622641 72 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 AL049780.3-201ENST00000624612 1583 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 MIR7-3-201ENST00000384898 110 ntBASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 MTCYBP7-201ENST00000419540 1134 ntBASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 AC244098.2-201ENST00000422068 99 ntBASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 AC105272.1-201ENST00000438604 198 ntBASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 RPS29P12-201ENST00000460178 152 ntBASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 AC023424.2-201ENST00000493479 777 ntBASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 AC090255.1-201ENST00000495779 349 ntBASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 AC110792.2-201ENST00000510278 224 ntBASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 IGLV3-17-201ENST00000519099 244 ntBASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 AC104115.2-201ENST00000523026 687 ntBASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 AC007115.1-201ENST00000546853 234 ntBASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 MIR4325-201ENST00000583049 90 ntBASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 AL122126.1-201ENST00000546905 1318 ntBASIC2.16□□□□□ -2.06
TCRBV3S1A0A5B6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
TCRBV3S1A0A5B6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
TCRBV3S1A0A5B6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 AL138880.1-201ENST00000405824 642 ntBASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 AL591034.1-201ENST00000407447 340 ntBASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 METTL5-204ENST00000409340 472 ntTSL 5 BASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 AL024507.1-201ENST00000412741 274 ntBASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 HMGB1P11-201ENST00000413899 637 ntBASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 RPS15AP28-201ENST00000435088 386 ntBASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 AC018634.1-201ENST00000437554 401 ntBASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 ARL5AP2-201ENST00000444698 533 ntBASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 DPPA3P1-201ENST00000448050 469 ntBASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 RPL23AP15-201ENST00000450202 459 ntBASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 MTCO3P35-201ENST00000485582 781 ntBASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 AC009901.1-201ENST00000506703 541 ntBASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 RNU6-1073P-201ENST00000517182 106 ntBASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 AP000790.1-201ENST00000528891 737 ntBASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 AL109618.2-201ENST00000605527 211 ntBASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 AC103810.6-201ENST00000606708 136 ntBASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 OR8B1P-202ENST00000641132 1178 ntBASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
TCRBV3S1A0A5B6 MTND5P1-201ENST00000445440 1375 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 MTCO1P8-201ENST00000416914 1523 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 SNORA14A-201ENST00000364773 135 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 DEFB109C-201ENST00000382575 264 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 DEFB109B-201ENST00000382656 264 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 RNU6-1027P-201ENST00000383998 107 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 RNU6-301P-201ENST00000384277 107 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 MIR34B-201ENST00000385076 84 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 ANAPC10P1-201ENST00000395991 556 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 ATP5F1P3-201ENST00000397213 657 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 ARF4P3-201ENST00000397387 509 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 RN7SKP140-201ENST00000411196 284 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms