Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 ELOCP26-201ENST00000436067 329 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AC083863.1-201ENST00000438811 231 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AP000542.1-201ENST00000448473 371 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 RPS17P13-201ENST00000448974 407 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 RPL38P1-201ENST00000460914 211 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AC087312.1-201ENST00000471411 480 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AC093840.1-201ENST00000511599 336 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AC010342.1-201ENST00000514047 877 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AP002748.2-201ENST00000528671 348 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AC022880.1-201ENST00000534017 973 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 MIR5697-201ENST00000578045 78 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AC068790.5-201ENST00000602741 355 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AC025588.3-201ENST00000604182 274 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 ARF4P1-201ENST00000605447 541 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 HMGB1P50-201ENST00000605814 607 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AP003117.2-201ENST00000606010 545 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AC015540.1-201ENST00000615828 501 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AC104010.1-201ENST00000616889 150 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AL591424.2-201ENST00000617023 128 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AC073968.1-201ENST00000618594 637 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 CRYM-AS1-204ENST00000637983 556 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 OR5BE1P-202ENST00000641168 1176 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 LINC02471-203ENST00000641941 4752 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 DDX18P3-201ENST00000404856 2007 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 DCAF13P1-201ENST00000495256 1330 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 RNU6-28P-201ENST00000362378 107 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 SNORA60-201ENST00000362396 134 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 RNU6-744P-201ENST00000365557 107 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 RNU6-1316P-201ENST00000384242 108 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 RNU6-348P-201ENST00000384386 107 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 SNORA70E-201ENST00000384492 135 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 Y_RNA.599-201ENST00000410489 109 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 RPL23AP38-201ENST00000423801 469 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 USP9YP14-201ENST00000430663 563 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 HMGB1P37-201ENST00000439613 609 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 ELOCP30-201ENST00000447108 299 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 MTCYBP1-201ENST00000454315 1119 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 BTF3P5-201ENST00000457252 467 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 AP001992.1-205ENST00000462248 379 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 HMGB1P36-201ENST00000487709 576 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 BTF3L4P4-201ENST00000506381 449 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 TXNP6-201ENST00000510190 310 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 MTCO3P44-201ENST00000510977 541 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 HIGD1AP3-201ENST00000515857 278 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 RNU6-720P-201ENST00000516363 108 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 RNU6-405P-201ENST00000516637 110 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 HNRNPCP4-201ENST00000571636 900 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 AL009028.1-201ENST00000604895 802 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 AC105429.2-201ENST00000610567 517 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 AC087241.4-201ENST00000612441 480 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 AL445567.2-201ENST00000618935 498 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 AL596245.1-201ENST00000618994 362 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms