Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 YWHAZP1-201ENST00000556286 722 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AGGF1P8-201ENST00000562979 1000 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 MIR4504-201ENST00000577413 92 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AL022067.1-201ENST00000602426 454 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AC007687.1-201ENST00000602704 304 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AL365400.2-201ENST00000605604 902 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AC009269.6-201ENST00000621778 588 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 MTND5P3-201ENST00000438536 1800 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 SAGE4P-201ENST00000442271 3381 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 AC000403.1-201ENST00000613696 3585 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 MIR122-201ENST00000385044 85 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 MIR620-201ENST00000385232 95 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 MTCO3P31-201ENST00000405526 789 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 AL139098.1-201ENST00000407291 389 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 AC013410.2-201ENST00000422627 201 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 SDR42E1P3-201ENST00000438345 502 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 AL138799.3-201ENST00000438968 350 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 PTGES3P1-201ENST00000439531 483 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 AL592437.1-201ENST00000443781 492 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 RN7SL20P-201ENST00000488827 297 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 AC068305.1-201ENST00000497406 726 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 NDUFB4P9-201ENST00000511646 388 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 RNU2-58P-201ENST00000516403 183 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 SNORA64.4-201ENST00000516632 81 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 AC023632.1-201ENST00000518463 375 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 AC104417.1-201ENST00000523974 751 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 AC118942.1-201ENST00000529674 1035 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 OR8L1P-201ENST00000534005 955 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 OR6C73P-201ENST00000546432 358 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 LARP7P3-201ENST00000579888 337 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 BNIP3P39-201ENST00000601077 554 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 RNU6-1192P-201ENST00000612197 107 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 RNU6-489P-201ENST00000618289 107 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 AL353746.1-201ENST00000566293 6881 ntBASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SMIM28A0A1B0GU29 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 AC066616.2-201ENST00000559334 1481 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 RNU6-921P-201ENST00000384361 107 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 AL122016.1-201ENST00000403365 367 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 RPL32P35-201ENST00000415214 394 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 OR51AB1P-201ENST00000429046 620 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 HSFY7P-201ENST00000432672 318 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 HSFY8P-201ENST00000437934 318 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 HMGN2P21-201ENST00000447764 270 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 Z99714.1-201ENST00000450463 807 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 HSFY5P-201ENST00000453726 309 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 RPS20P32-201ENST00000456044 356 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 RPL9P32-201ENST00000464118 620 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 AL049873.1-201ENST00000480540 376 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 GAPDHP39-201ENST00000481866 979 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 AC106872.2-201ENST00000494303 480 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 AC048346.1-201ENST00000510247 144 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 RNU6-1028P-201ENST00000517164 93 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 RNU4-60P-201ENST00000517239 135 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 NDUFS5P6-201ENST00000529136 295 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms