Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 FCF1P3-201ENST00000496394 590 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 FTH1P21-201ENST00000512179 511 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC093853.1-201ENST00000515689 483 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNA5SP216-201ENST00000516111 123 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 SNORA70.14-201ENST00000516205 110 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNU6-150P-201ENST00000516237 95 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNA5SP315-201ENST00000516340 116 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNA5SP312-201ENST00000517068 116 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC022861.1-201ENST00000522981 663 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 OR4R3P-201ENST00000525084 838 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC239860.2-201ENST00000525886 270 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL139174.1-201ENST00000531489 886 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC007834.2-201ENST00000536310 343 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 CR383656.6-201ENST00000550518 394 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC009101.1-201ENST00000568135 242 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC135628.1-201ENST00000568867 534 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC136618.2-201ENST00000575091 400 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 MIR4284-201ENST00000578924 81 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC090616.2-202ENST00000584248 222 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL034351.1-201ENST00000605288 668 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC072039.2-201ENST00000608883 439 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC006329.2-201ENST00000611491 394 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL357080.1-201ENST00000617394 239 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL603755.1-201ENST00000619504 163 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL445264.1-201ENST00000621719 171 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC068057.2-201ENST00000624047 895 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL732372.2-225ENST00000642124 456 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC011477.1-204ENST00000623416 1325 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC007656.2-201ENST00000624902 4547 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL356473.1-201ENST00000406203 1408 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC066616.2-201ENST00000559334 1481 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNU6-433P-201ENST00000363216 104 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNU6-263P-201ENST00000363811 107 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNY3P9-201ENST00000384727 106 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNU6-821P-201ENST00000390995 107 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RPS26P8-201ENST00000393490 348 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 MTND2P18-201ENST00000419962 1030 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC007742.1-201ENST00000425789 329 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL590233.1-201ENST00000430017 456 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 ELOCP26-201ENST00000436067 329 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 OR6K5P-201ENST00000447050 945 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 OR9M1P-201ENST00000459641 921 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RPS7P7-201ENST00000463499 571 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC004801.2-202ENST00000463559 283 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 SYPL1P1-201ENST00000473622 768 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC026784.1-201ENST00000507986 352 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 OSBPL9P5-201ENST00000542581 171 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC023161.2-201ENST00000551218 780 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC112230.1-201ENST00000604342 547 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 IGHV3-29-201ENST00000604817 344 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL049634.3-201ENST00000604968 457 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 HMGN2P28-201ENST00000606102 262 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNU6-88P-201ENST00000606801 100 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC004223.4-201ENST00000612426 332 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL031667.3-201ENST00000620124 655 ntBASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.36□□□□□ -1.87
TRBV4-1A0A0J9YWV2 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms