Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 TMSB4XP6-201ENST00000415187 135 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AC092647.1-201ENST00000420654 287 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AL139247.1-201ENST00000422768 325 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 TMSB4XP1-201ENST00000424567 135 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AF228730.2-201ENST00000438784 848 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 NOTCH2P1-201ENST00000443481 624 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 TAF9P1-201ENST00000445421 515 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 RPL29P29-201ENST00000448725 423 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 RPL23AP15-201ENST00000450202 459 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 TAF9P2-201ENST00000454958 515 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 MTND4LP3-201ENST00000468320 276 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 NIPA2P2-201ENST00000496376 1083 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AC080014.1-201ENST00000496877 1201 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AC108941.1-201ENST00000502853 530 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 RAC1P2-201ENST00000511164 579 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 RPL7L1P13-201ENST00000511702 739 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 SNORA70.14-201ENST00000516205 110 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 RNY4P37-201ENST00000516225 96 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AC027309.2-201ENST00000520566 192 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 OR5AK1P-201ENST00000524837 922 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AP000811.1-201ENST00000603803 651 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AC091946.2-201ENST00000606105 291 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AC008083.4-201ENST00000615076 444 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AF246928.1-201ENST00000623768 87 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 MIR4496-201ENST00000635896 61 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AC011978.2-201ENST00000569835 2054 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 EXOC5P1-201ENST00000510543 1969 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 AC024560.2-201ENST00000507981 1497 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 Y_RNA.51-201ENST00000362725 102 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 Y_RNA.201-201ENST00000364052 96 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 RNA5SP167-201ENST00000365461 116 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 Y_RNA.436-201ENST00000384097 102 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 U8.11-201ENST00000384699 133 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 U8.12-201ENST00000384701 133 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 RNU2-21P-201ENST00000410368 188 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 RN7SKP56-201ENST00000410513 331 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 BTF3L4P1-201ENST00000413813 468 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 AL159169.1-201ENST00000421119 127 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 SNORA71B-202ENST00000439232 272 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 AL500522.2-201ENST00000448562 343 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 NANOGP10-201ENST00000453325 895 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 U8.18-201ENST00000459285 133 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 HMGB1P28-201ENST00000507778 552 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 RNA5SP208-201ENST00000516156 78 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 RNA5SP309-201ENST00000516670 106 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 OR8L1P-201ENST00000534005 955 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 OR7K1P-201ENST00000546439 926 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 MIR1254-2-201ENST00000579553 63 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 AC112230.1-201ENST00000604342 547 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 AL034351.1-201ENST00000605288 668 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 AC012557.2-201ENST00000605919 418 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 AL121772.2-201ENST00000614331 297 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 Z69908.1-201ENST00000622603 247 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 AC034229.5-201ENST00000624258 185 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 CR381670.1-201ENST00000624291 1693 ntBASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms