Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MTCYBP5-201ENST00000423752 1135 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 RPL18P10-201ENST00000425606 538 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 ISCA1P6-201ENST00000427740 390 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AC093156.1-201ENST00000440382 670 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 NANOGNBP1-201ENST00000448444 480 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AC108059.3-201ENST00000456388 214 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 RPL9P6-201ENST00000492764 598 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 SCARNA22-201ENST00000503991 125 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AC111000.3-201ENST00000508057 576 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 RNA5SP249-201ENST00000516127 99 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 RNU6-1178P-201ENST00000516674 107 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 Vault.3-201ENST00000516676 95 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 RN7SKP92-201ENST00000517266 244 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AC123904.2-201ENST00000548059 300 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AC087883.1-201ENST00000551882 391 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 KC877982.1-201ENST00000602313 470 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AP000860.1-201ENST00000605250 559 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AC004908.2-201ENST00000609090 574 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AC007497.1-201ENST00000610421 561 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 TUG1_1.1-201ENST00000610654 145 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AL158196.1-201ENST00000616786 434 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AC068254.2-201ENST00000623938 3577 ntBASIC4.65□□□□□ -1.66
PCDHGA3Q9Y5H0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.65□□□□□ -1.66
PCDHGA3Q9Y5H0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
PCDHGA3Q9Y5H0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHGA3Q9Y5H0 AC024560.2-201ENST00000507981 1497 ntBASIC4.65□□□□□ -1.66
PCDHGA3Q9Y5H0 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.65□□□□□ -1.66
PCDHGA3Q9Y5H0 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 RNY1P12-201ENST00000364251 105 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 RNU6-114P-201ENST00000384704 105 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 RNU6-278P-201ENST00000390945 109 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AL035079.1-201ENST00000405210 287 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AL356967.1-201ENST00000406305 431 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 RNU4-78P-201ENST00000410940 126 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 BEND7P1-201ENST00000422058 457 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AC119618.1-201ENST00000434191 222 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AL450023.3-201ENST00000440592 271 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AC093392.2-201ENST00000450682 337 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 CYCSP34-201ENST00000458172 304 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 RPS23P7-201ENST00000466210 444 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AC093278.1-201ENST00000494700 600 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AC114967.1-201ENST00000504890 259 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 HMGB1P29-201ENST00000505659 499 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AC108078.1-201ENST00000508073 725 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 RNU6-528P-201ENST00000516926 100 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AP003181.2-201ENST00000528941 181 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AC136624.4-201ENST00000573044 370 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 MIR3146-201ENST00000580367 79 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 COX6CP3-201ENST00000580869 223 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AC090616.5-202ENST00000582111 297 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 RPL26P30-202ENST00000602923 645 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 OR6R2P-201ENST00000609216 300 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AL355472.4-201ENST00000610233 626 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AC083809.1-201ENST00000615051 472 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 MIR6853-201ENST00000619642 74 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AC019206.1-201ENST00000621938 425 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 AC006065.5-201ENST00000623427 349 ntBASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms