Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 USP9YP15-201ENST00000442391 422 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 WASF1P1-201ENST00000447560 1131 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 AL691482.1-201ENST00000453255 87 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 SNORD121B-201ENST00000458838 81 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 PRDX4P1-201ENST00000507189 574 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 NDUFB5P1-201ENST00000508134 564 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 Y_RNA.704-201ENST00000516851 102 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 MYL12AP1-201ENST00000518490 515 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 SETP2-201ENST00000553886 926 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 MTND6P33-201ENST00000571794 183 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 MIR3146-201ENST00000580367 79 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 AC007448.1-201ENST00000582714 234 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 MIR4691-201ENST00000583764 85 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 AC104458.1-201ENST00000608243 463 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 MIR7154-201ENST00000620673 73 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 AL159972.1-201ENST00000625150 448 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
R3HCC1Q9Y3T6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
R3HCC1Q9Y3T6 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
R3HCC1Q9Y3T6 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
R3HCC1Q9Y3T6 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.4□□□□□ -1.55
R3HCC1Q9Y3T6 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
R3HCC1Q9Y3T6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
R3HCC1Q9Y3T6 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 Y_RNA.159-201ENST00000363674 87 ntBASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 SNORA70E-201ENST00000384492 135 ntBASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 EIF4A1P3-201ENST00000411521 244 ntBASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 LYPLA1P1-201ENST00000434514 622 ntBASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 UBE2V1P13-201ENST00000436983 439 ntBASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 FTH1P1-201ENST00000437933 532 ntBASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 MTND6P18-201ENST00000439477 513 ntBASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 MTND2P24-201ENST00000453434 806 ntBASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 RPL31P58-201ENST00000469001 379 ntBASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 RPL23AP41-201ENST00000484754 458 ntBASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 AC017037.2-201ENST00000513850 890 ntBASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 RNA5SP43-201ENST00000516559 110 ntBASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 AC068790.3-201ENST00000602988 553 ntBASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 AL356585.4-201ENST00000623078 1229 ntBASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 AC093535.2-201ENST00000624769 2326 ntBASIC5.39□□□□□ -1.55
R3HCC1Q9Y3T6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 SNORA73.1-201ENST00000363107 205 ntBASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 RNA5SP123-201ENST00000363244 119 ntBASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 RNU6-263P-201ENST00000363811 107 ntBASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 RN7SKP224-201ENST00000364140 325 ntBASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 Y_RNA.402-201ENST00000383972 102 ntBASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 HMGB3P20-201ENST00000417997 600 ntBASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 AF186996.5-201ENST00000418098 904 ntBASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 RPS15AP12-201ENST00000419498 388 ntBASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 AL353193.1-201ENST00000421444 268 ntBASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 BX323845.1-201ENST00000432417 179 ntBASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 AC004938.1-201ENST00000438468 308 ntBASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 AL772161.1-201ENST00000439130 476 ntBASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 RPS29P9-201ENST00000440360 171 ntBASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 RPL34P20-201ENST00000442771 351 ntBASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 CEACAMP6-201ENST00000452007 574 ntBASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 AC006967.1-201ENST00000467608 589 ntBASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 HMGB1P25-201ENST00000468402 607 ntBASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.38□□□□□ -1.55
R3HCC1Q9Y3T6 BX284632.1-201ENST00000478218 541 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms