Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 AL359893.1-201ENST00000447628 1580 ntBASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 ZNF734P-201ENST00000419494 1534 ntBASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 AC117529.2-201ENST00000512159 2068 ntBASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 VN1R8P-201ENST00000407739 893 ntBASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 AC083863.1-201ENST00000438811 231 ntBASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 MTCO3P16-201ENST00000454456 754 ntBASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 AC078918.1-201ENST00000498515 228 ntBASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 IGLV3-26-201ENST00000520756 302 ntBASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 AL121766.1-201ENST00000547436 487 ntBASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 CBX3P5-201ENST00000552017 521 ntBASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 AC006270.2-201ENST00000578523 652 ntBASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 AP005136.1-201ENST00000579765 429 ntBASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 MIR5187-201ENST00000583479 76 ntBASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 AL031985.2-201ENST00000600955 480 ntBASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 AC012468.1-201ENST00000604888 430 ntBASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 AC008083.4-201ENST00000615076 444 ntBASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 Z69908.1-201ENST00000622603 247 ntBASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 AC098679.5-201ENST00000624394 571 ntBASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CDK11AQ9UQ88 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 RNA5SP502-201ENST00000362694 119 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 Y_RNA.77-201ENST00000362962 107 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 Y_RNA.201-201ENST00000364052 96 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 MIR34B-201ENST00000385076 84 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 ATP5F1P4-201ENST00000397288 746 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 RPS3AP26-201ENST00000398259 784 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 RNU2-28P-201ENST00000410457 189 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 RPL7AP73-201ENST00000413490 353 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 VN1R108P-201ENST00000431580 830 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 SLC31A1P1-201ENST00000451221 567 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 AC010301.1-201ENST00000473936 355 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 AC072039.1-201ENST00000477611 581 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 HMGN1P11-201ENST00000508668 303 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 IGHV3-32-201ENST00000519182 355 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 IGLVIV-53-201ENST00000520107 367 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 GTF2IP22-201ENST00000554443 182 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 ACTR3BP3-201ENST00000565577 979 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 AC012435.1-202ENST00000568772 240 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 AF131215.7-201ENST00000602443 707 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 AC012557.2-201ENST00000605919 418 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 AL513477.2-201ENST00000607858 568 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 AL031667.3-201ENST00000620124 655 ntBASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK11AQ9UQ88 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.09□□□□□ -1.44
CDK11AQ9UQ88 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 RNA5SP52-201ENST00000362448 134 ntBASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 Y_RNA.318-201ENST00000365131 97 ntBASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 SNORA9-201ENST00000384215 133 ntBASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 AC007066.1-201ENST00000392902 381 ntBASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 RNU6-920P-201ENST00000410926 92 ntBASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 AL139247.1-201ENST00000422768 325 ntBASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 HMGN2P31-201ENST00000432430 273 ntBASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 MTCO3P5-201ENST00000433620 714 ntBASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 AC129850.1-201ENST00000436203 508 ntBASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 MTCO1P48-201ENST00000448024 1096 ntBASIC6.08□□□□□ -1.44
CDK11AQ9UQ88 RPL18AP17-201ENST00000455326 198 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms