Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SHANK2Q9UPX8 SNORA41-201ENST00000384675 132 ntBASIC3.56□□□□□ -1.84
SHANK2Q9UPX8 AL024474.1-201ENST00000404655 591 ntBASIC3.56□□□□□ -1.84
SHANK2Q9UPX8 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SHANK2Q9UPX8 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.56□□□□□ -1.84
SHANK2Q9UPX8 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.56□□□□□ -1.84
SHANK2Q9UPX8 Z99127.2-201ENST00000441426 334 ntBASIC3.56□□□□□ -1.84
SHANK2Q9UPX8 NDUFB4P9-201ENST00000511646 388 ntBASIC3.56□□□□□ -1.84
SHANK2Q9UPX8 AC021269.2-201ENST00000532318 330 ntBASIC3.56□□□□□ -1.84
SHANK2Q9UPX8 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.56□□□□□ -1.84
SHANK2Q9UPX8 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.56□□□□□ -1.84
SHANK2Q9UPX8 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.56□□□□□ -1.84
SHANK2Q9UPX8 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SHANK2Q9UPX8 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.56□□□□□ -1.84
SHANK2Q9UPX8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SHANK2Q9UPX8 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHANK2Q9UPX8 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SHANK2Q9UPX8 NSRP1P1-201ENST00000444067 1693 ntBASIC3.55□□□□□ -1.84
SHANK2Q9UPX8 RNU6-14P-201ENST00000384630 106 ntBASIC3.55□□□□□ -1.84
SHANK2Q9UPX8 NDUFB4P5-201ENST00000415445 361 ntBASIC3.55□□□□□ -1.84
SHANK2Q9UPX8 RWDD4P2-201ENST00000426392 563 ntBASIC3.55□□□□□ -1.84
SHANK2Q9UPX8 AC018634.1-201ENST00000437554 401 ntBASIC3.55□□□□□ -1.84
SHANK2Q9UPX8 HMGB1P48-201ENST00000446155 598 ntBASIC3.55□□□□□ -1.84
SHANK2Q9UPX8 RWDD4P1-201ENST00000488019 565 ntBASIC3.55□□□□□ -1.84
SHANK2Q9UPX8 ACTR6P1-201ENST00000514311 1104 ntBASIC3.55□□□□□ -1.84
SHANK2Q9UPX8 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.55□□□□□ -1.84
SHANK2Q9UPX8 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.55□□□□□ -1.84
SHANK2Q9UPX8 AL136964.1-201ENST00000622038 2990 ntBASIC3.55□□□□□ -1.84
SHANK2Q9UPX8 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SHANK2Q9UPX8 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHANK2Q9UPX8 AC093010.3-201ENST00000570269 15214 ntBASIC3.55□□□□□ -1.84
SHANK2Q9UPX8 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SHANK2Q9UPX8 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 FAT1P1-201ENST00000406588 507 ntBASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 AC048351.1-201ENST00000420064 602 ntBASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 AL121882.1-201ENST00000422893 417 ntBASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 AL354710.1-201ENST00000453641 246 ntBASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 AC108729.3-201ENST00000513484 108 ntBASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 RNU6-1334P-201ENST00000516032 105 ntBASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 AC005539.1-201ENST00000443768 1479 ntBASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 AC093151.1-201ENST00000427711 313 ntBASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 AC245517.4-201ENST00000448601 281 ntBASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 RN7SKP210-201ENST00000459176 261 ntBASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 RPL23AP42-201ENST00000471152 471 ntBASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 AC026436.1-201ENST00000510537 270 ntBASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 RNU6-1053P-201ENST00000515930 101 ntBASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 RNA5SP281-201ENST00000516504 135 ntBASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.54□□□□□ -1.84
SHANK2Q9UPX8 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SHANK2Q9UPX8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHANK2Q9UPX8 SNORA64-201ENST00000384674 134 ntBASIC3.53□□□□□ -1.84
SHANK2Q9UPX8 MIR142-201ENST00000384835 87 ntBASIC3.53□□□□□ -1.84
SHANK2Q9UPX8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SHANK2Q9UPX8 AL591416.1-201ENST00000404015 867 ntBASIC3.53□□□□□ -1.84
SHANK2Q9UPX8 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SHANK2Q9UPX8 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.53□□□□□ -1.84
SHANK2Q9UPX8 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.53□□□□□ -1.84
SHANK2Q9UPX8 VTA1P2-201ENST00000520205 911 ntBASIC3.53□□□□□ -1.84
SHANK2Q9UPX8 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.53□□□□□ -1.84
SHANK2Q9UPX8 MIR4781-201ENST00000585250 76 ntBASIC3.53□□□□□ -1.84
SHANK2Q9UPX8 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.52□□□□□ -1.85
SHANK2Q9UPX8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHANK2Q9UPX8 ZNF355P-201ENST00000427301 3216 ntBASIC3.52□□□□□ -1.85
SHANK2Q9UPX8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SHANK2Q9UPX8 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SHANK2Q9UPX8 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHANK2Q9UPX8 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
SHANK2Q9UPX8 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
SHANK2Q9UPX8 SCARNA17.1-201ENST00000516211 143 ntBASIC3.52□□□□□ -1.85
SHANK2Q9UPX8 SCARNA17.2-201ENST00000516334 143 ntBASIC3.52□□□□□ -1.85
SHANK2Q9UPX8 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.52□□□□□ -1.85
SHANK2Q9UPX8 AC078814.3-201ENST00000553036 491 ntBASIC3.52□□□□□ -1.85
SHANK2Q9UPX8 MTCYBP28-201ENST00000566728 1132 ntBASIC3.52□□□□□ -1.85
SHANK2Q9UPX8 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.52□□□□□ -1.85
SHANK2Q9UPX8 AC009318.2-201ENST00000610917 651 ntBASIC3.52□□□□□ -1.85
SHANK2Q9UPX8 SCARNA17.4-201ENST00000614296 143 ntBASIC3.52□□□□□ -1.85
SHANK2Q9UPX8 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHANK2Q9UPX8 AL450326.2-201ENST00000421913 1962 ntBASIC3.52□□□□□ -1.85
SHANK2Q9UPX8 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.51□□□□□ -1.85
SHANK2Q9UPX8 AC022336.2-201ENST00000568966 2538 ntBASIC3.51□□□□□ -1.85
SHANK2Q9UPX8 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHANK2Q9UPX8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.51□□□□□ -1.85
SHANK2Q9UPX8 AL512646.1-201ENST00000269395 1077 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms