Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 AC079741.1-201ENST00000321498 212 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 Y_RNA.5-201ENST00000362334 102 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 RNU6-179P-201ENST00000363350 107 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 AC068538.1-201ENST00000376856 336 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 MIR23A-201ENST00000385245 73 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 RNU6-278P-201ENST00000390945 109 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 AL603908.1-201ENST00000406098 201 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 RNU6-954P-201ENST00000411355 107 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 HMGB3P2-201ENST00000411913 584 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 DDX39BP1-205ENST00000422507 192 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 AL591212.2-201ENST00000433923 257 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 RPS26P56-201ENST00000444468 240 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 RAC1P7-201ENST00000445367 377 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 AC087879.1-201ENST00000474343 374 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 RNU4ATAC7P-201ENST00000516280 125 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 AC078899.1-201ENST00000521432 1185 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 COX6CP3-201ENST00000580869 223 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 AL669831.3-213ENST00000636676 183 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 EFTUD1P2-201ENST00000514817 1603 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 AL451142.2-201ENST00000429076 2090 ntBASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ZC3H4Q9UPT8 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AC022164.1-201ENST00000568767 2673 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AP004607.3-201ENST00000530354 3915 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AC126755.2-208ENST00000327792 462 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AC138969.1-213ENST00000331436 462 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 RNU6-1115P-201ENST00000362490 106 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 RNU6-238P-201ENST00000363313 106 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 MIR19A-201ENST00000384878 82 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 Y_RNA.646-201ENST00000410980 101 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 VDAC1P9-201ENST00000412766 841 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 COX6CP15-201ENST00000426313 211 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AL590399.2-201ENST00000427536 309 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 OR2AS1P-201ENST00000427827 319 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AC239809.1-201ENST00000450470 217 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AC097484.1-201ENST00000471148 389 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AC026782.1-201ENST00000512952 449 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 RNU6-635P-201ENST00000516651 102 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AC100784.1-201ENST00000522790 310 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AP000857.1-201ENST00000532151 543 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AC008033.2-201ENST00000542626 177 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AL049779.3-201ENST00000557141 606 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 MIR3672-201ENST00000584290 82 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AC025857.2-201ENST00000602711 238 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AC104687.2-201ENST00000604442 342 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 AC005332.5-201ENST00000591222 2919 ntBASIC6.62□□□□□ -1.35
ZC3H4Q9UPT8 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms