Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 THAP12P9-201ENST00000503971 2360 ntBASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 Y_RNA.215-201ENST00000364204 112 ntBASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 AC016739.1-201ENST00000405359 345 ntBASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 VTI1BP4-201ENST00000427516 527 ntBASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 RNU7-138P-201ENST00000459479 64 ntBASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 AL122020.1-201ENST00000472287 459 ntBASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 RPS17P5-201ENST00000498293 408 ntBASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 TOMM22P4-201ENST00000511318 336 ntBASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 RNA5SP271-201ENST00000516700 88 ntBASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 RPL23AP84-201ENST00000571193 464 ntBASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 FAM60BP-201ENST00000578364 658 ntBASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 AC015982.1-201ENST00000608113 465 ntBASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
TRIM35Q9UPQ4 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 SNORA63.4-201ENST00000362763 126 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 SNORD113-8-201ENST00000363497 74 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 RNU6-449P-201ENST00000383914 107 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 RPS4XP7-201ENST00000406274 780 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 RNU5E-9P-201ENST00000411164 104 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 HMGN1P20-201ENST00000411849 300 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 AC093106.2-201ENST00000428212 385 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 MTCO1P5-201ENST00000433573 344 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 AL663074.2-201ENST00000440621 479 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 ISCUP1-201ENST00000454451 448 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 AL139099.1-201ENST00000497398 403 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 AC006427.1-201ENST00000514359 712 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 RNU6-496P-201ENST00000516145 99 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 RN7SKP288-201ENST00000516227 268 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 RNU6-426P-201ENST00000516464 97 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 CDH12P4-201ENST00000517835 295 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 CDH12P3-201ENST00000517935 295 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 CDH12P1-201ENST00000518435 295 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 WBP1LP3-201ENST00000523033 208 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 OR10G5P-201ENST00000532733 358 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 AC107980.1-201ENST00000558671 3355 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 AC005224.3-201ENST00000584683 2140 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 EXOC5P1-201ENST00000510543 1969 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 AC090220.1-201ENST00000593078 1699 ntBASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
TRIM35Q9UPQ4 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 AC022164.1-201ENST00000568767 2673 ntBASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 RNA5SP267-201ENST00000364893 126 ntBASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 AC019155.1-201ENST00000382242 574 ntBASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 U3.42-201ENST00000408746 214 ntBASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 MRPL53P1-201ENST00000414323 319 ntBASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 RN7SL717P-201ENST00000478343 297 ntBASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 RPL30P10-201ENST00000488148 337 ntBASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 AC007016.1-201ENST00000512110 244 ntBASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 RNU6-64P-201ENST00000517119 105 ntBASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 AC104576.1-201ENST00000524225 88 ntBASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms