Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 TEX21P-201ENST00000447107 1476 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 RNU6-1339P-201ENST00000363574 91 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 SNORA4.1-201ENST00000364263 144 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 RNU6-534P-201ENST00000364877 106 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AL592291.1-201ENST00000403830 352 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 SNORA57.3-201ENST00000411095 141 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AL513185.2-201ENST00000425543 193 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 RPEP2-201ENST00000432149 701 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 PSPHP1-201ENST00000450062 261 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 CECR9-201ENST00000453421 199 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AP001486.1-201ENST00000463339 476 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AL139099.1-201ENST00000497398 403 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AC105252.1-201ENST00000503089 286 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 KLRA1P-201ENST00000503499 986 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 COX6CP5-201ENST00000527162 228 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 YWHAEP7-203ENST00000622054 312 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AC138649.3-201ENST00000622154 254 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
COL17A1Q9UMD9 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL17A1Q9UMD9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL17A1Q9UMD9 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL17A1Q9UMD9 AC000374.1-201ENST00000434698 1745 ntBASIC6.4□□□□□ -1.38
COL17A1Q9UMD9 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL17A1Q9UMD9 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL17A1Q9UMD9 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
COL17A1Q9UMD9 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 Y_RNA.431-201ENST00000384086 102 ntBASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 RNU6-1105P-201ENST00000384774 107 ntBASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 MIR30B-201ENST00000384850 88 ntBASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 TMSB4XP8-201ENST00000402089 135 ntBASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 TMSB4XP6-201ENST00000415187 135 ntBASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 RPL36AP10-201ENST00000421785 322 ntBASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 TMSB4XP1-201ENST00000424567 135 ntBASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 CBX3P6-201ENST00000430257 527 ntBASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 AC104687.1-201ENST00000485829 412 ntBASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 RN7SL812P-201ENST00000493791 279 ntBASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 AF235103.2-201ENST00000525753 346 ntBASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 AP005597.4-201ENST00000526762 229 ntBASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 CR392039.4-201ENST00000624968 501 ntBASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC6.4□□□□□ -1.39
COL17A1Q9UMD9 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 AC083837.1-201ENST00000565297 2994 ntBASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 AC011155.1-201ENST00000316512 456 ntBASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 Y_RNA.89-201ENST00000363031 102 ntBASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 RNU1-83P-201ENST00000363426 164 ntBASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 SNORA48.2-201ENST00000390926 124 ntBASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 AC104297.1-201ENST00000393779 870 ntBASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 AL356057.3-201ENST00000402607 340 ntBASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 MIR1289-1-201ENST00000408836 144 ntBASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 RPS7P13-201ENST00000413955 498 ntBASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 MTCYBP45-201ENST00000435243 565 ntBASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 AC004938.1-201ENST00000438468 308 ntBASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 AC130509.1-201ENST00000464158 433 ntBASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 AC021205.1-201ENST00000468797 348 ntBASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 MTND1P3-201ENST00000484956 952 ntBASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 HSPD1P15-201ENST00000505573 1122 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms