Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 RPS24P6-201ENST00000452670 400 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 PTGES3P5-201ENST00000455109 434 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 HMGN1P18-201ENST00000457642 277 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC092754.2-201ENST00000463506 460 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 RPL21P104-201ENST00000464143 478 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC006445.1-201ENST00000491925 405 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC011352.3-201ENST00000505162 593 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC012182.1-201ENST00000570133 895 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 MIR4789-201ENST00000577469 82 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AL590282.1-201ENST00000610379 1136 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AL512506.1-201ENST00000613918 449 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC090116.1-201ENST00000615679 446 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC091953.5-201ENST00000622919 233 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC073592.7-201ENST00000623659 507 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC006963.1-201ENST00000624003 1052 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC091903.1-201ENST00000624322 454 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AP001002.2-201ENST00000625137 386 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 RNU1-75P-201ENST00000347264 129 ntBASIC3.36□□□□□ -1.87
CDH9Q9ULB4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 RPL31P1-201ENST00000398116 372 ntBASIC3.36□□□□□ -1.87
CDH9Q9ULB4 RPL23AP47-201ENST00000408017 460 ntBASIC3.36□□□□□ -1.87
CDH9Q9ULB4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 UBE2D3P3-201ENST00000426992 425 ntBASIC3.36□□□□□ -1.87
CDH9Q9ULB4 MTATP6P11-201ENST00000428071 670 ntBASIC3.36□□□□□ -1.87
CDH9Q9ULB4 BX679664.1-201ENST00000434429 253 ntBASIC3.36□□□□□ -1.87
CDH9Q9ULB4 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 NPM1P13-201ENST00000452663 865 ntBASIC3.36□□□□□ -1.87
CDH9Q9ULB4 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.36□□□□□ -1.87
CDH9Q9ULB4 snoU13.24-201ENST00000458998 104 ntBASIC3.36□□□□□ -1.87
CDH9Q9ULB4 RNU7-140P-201ENST00000459546 60 ntBASIC3.36□□□□□ -1.87
CDH9Q9ULB4 MTCO2P9-201ENST00000503214 694 ntBASIC3.36□□□□□ -1.87
CDH9Q9ULB4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 GTF2IP8-201ENST00000560687 584 ntBASIC3.36□□□□□ -1.87
CDH9Q9ULB4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 AC010735.1-201ENST00000567305 1026 ntBASIC3.36□□□□□ -1.87
CDH9Q9ULB4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 AC103881.1-201ENST00000603476 538 ntBASIC3.36□□□□□ -1.87
CDH9Q9ULB4 AL356094.1-201ENST00000624663 1212 ntBASIC3.36□□□□□ -1.87
CDH9Q9ULB4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 MIR622-201ENST00000638396 96 ntBASIC3.36□□□□□ -1.87
CDH9Q9ULB4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 OR5BR1P-201ENST00000524992 1330 ntBASIC3.36□□□□□ -1.87
CDH9Q9ULB4 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH9Q9ULB4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.35□□□□□ -1.87
CDH9Q9ULB4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.35□□□□□ -1.87
CDH9Q9ULB4 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDH9Q9ULB4 RNVU1-3-201ENST00000364313 161 ntBASIC3.35□□□□□ -1.87
CDH9Q9ULB4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH9Q9ULB4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CDH9Q9ULB4 AL121978.1-201ENST00000402778 359 ntBASIC3.35□□□□□ -1.87
CDH9Q9ULB4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH9Q9ULB4 AL024507.1-201ENST00000412741 274 ntBASIC3.35□□□□□ -1.87
CDH9Q9ULB4 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH9Q9ULB4 GLRXP1-201ENST00000423261 334 ntBASIC3.35□□□□□ -1.87
CDH9Q9ULB4 HSFY1P1-201ENST00000423928 1178 ntBASIC3.35□□□□□ -1.87
CDH9Q9ULB4 AC006548.1-201ENST00000427470 102 ntBASIC3.35□□□□□ -1.87
CDH9Q9ULB4 RPS7P2-201ENST00000435134 607 ntBASIC3.35□□□□□ -1.87
CDH9Q9ULB4 AC234064.1-201ENST00000436312 247 ntBASIC3.35□□□□□ -1.87
CDH9Q9ULB4 CYCSP32-201ENST00000440548 321 ntBASIC3.35□□□□□ -1.87
CDH9Q9ULB4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.35□□□□□ -1.87
CDH9Q9ULB4 AC004022.1-201ENST00000447766 1066 ntBASIC3.35□□□□□ -1.87
CDH9Q9ULB4 RPL7P52-201ENST00000449200 742 ntBASIC3.35□□□□□ -1.87
CDH9Q9ULB4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH9Q9ULB4 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH9Q9ULB4 MTND2P31-201ENST00000512602 616 ntBASIC3.35□□□□□ -1.87
CDH9Q9ULB4 AP003049.1-201ENST00000529418 457 ntBASIC3.35□□□□□ -1.87
CDH9Q9ULB4 AP003168.1-201ENST00000530091 307 ntBASIC3.35□□□□□ -1.87
CDH9Q9ULB4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.35□□□□□ -1.87
CDH9Q9ULB4 AC010198.2-201ENST00000550612 259 ntBASIC3.35□□□□□ -1.87
CDH9Q9ULB4 OR4T1P-201ENST00000554933 911 ntBASIC3.35□□□□□ -1.87
CDH9Q9ULB4 UBL5P2-201ENST00000583788 219 ntBASIC3.35□□□□□ -1.87
CDH9Q9ULB4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH9Q9ULB4 AC005776.1-201ENST00000603164 290 ntBASIC3.35□□□□□ -1.87
CDH9Q9ULB4 AL355812.1-201ENST00000603215 216 ntBASIC3.35□□□□□ -1.87
CDH9Q9ULB4 DPRXP5-201ENST00000604662 539 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms