Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.01□□□□□ -1.93
SCN11AQ9UI33 MTND5P21-201ENST00000531961 522 ntBASIC3.01□□□□□ -1.93
SCN11AQ9UI33 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
SCN11AQ9UI33 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.01□□□□□ -1.93
SCN11AQ9UI33 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.01□□□□□ -1.93
SCN11AQ9UI33 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.01□□□□□ -1.93
SCN11AQ9UI33 GMCL1P2-201ENST00000605230 823 ntBASIC3.01□□□□□ -1.93
SCN11AQ9UI33 AC099778.2-201ENST00000610904 211 ntBASIC3.01□□□□□ -1.93
SCN11AQ9UI33 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SCN11AQ9UI33 AL512643.1-201ENST00000635735 524 ntBASIC3.01□□□□□ -1.93
SCN11AQ9UI33 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.01□□□□□ -1.93
SCN11AQ9UI33 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SCN11AQ9UI33 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3□□□□□ -1.93
SCN11AQ9UI33 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SCN11AQ9UI33 SNORA25.6-201ENST00000364121 118 ntBASIC3□□□□□ -1.93
SCN11AQ9UI33 AL591416.1-201ENST00000404015 867 ntBASIC3□□□□□ -1.93
SCN11AQ9UI33 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3□□□□□ -1.93
SCN11AQ9UI33 AC068587.2-201ENST00000478386 781 ntBASIC3□□□□□ -1.93
SCN11AQ9UI33 RPL23AP44-201ENST00000482216 473 ntBASIC3□□□□□ -1.93
SCN11AQ9UI33 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3□□□□□ -1.93
SCN11AQ9UI33 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3□□□□□ -1.93
SCN11AQ9UI33 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3□□□□□ -1.93
SCN11AQ9UI33 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3□□□□□ -1.93
SCN11AQ9UI33 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3□□□□□ -1.93
SCN11AQ9UI33 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3□□□□□ -1.93
SCN11AQ9UI33 NRBF2P1-201ENST00000587407 859 ntBASIC3□□□□□ -1.93
SCN11AQ9UI33 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3□□□□□ -1.93
SCN11AQ9UI33 PISRT1-201ENST00000626175 531 ntBASIC3□□□□□ -1.93
SCN11AQ9UI33 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SCN11AQ9UI33 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
SCN11AQ9UI33 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SCN11AQ9UI33 AC087385.1-201ENST00000475062 312 ntBASIC3□□□□□ -1.93
SCN11AQ9UI33 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3□□□□□ -1.93
SCN11AQ9UI33 MIR5007-201ENST00000583098 95 ntBASIC3□□□□□ -1.93
SCN11AQ9UI33 AC067747.1-201ENST00000608026 250 ntBASIC3□□□□□ -1.93
SCN11AQ9UI33 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SCN11AQ9UI33 CUL1P1-201ENST00000509510 2425 ntBASIC2.99□□□□□ -1.93
SCN11AQ9UI33 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SCN11AQ9UI33 HMGB1P11-201ENST00000413899 637 ntBASIC2.99□□□□□ -1.93
SCN11AQ9UI33 GAPDHP27-201ENST00000447427 1020 ntBASIC2.99□□□□□ -1.93
SCN11AQ9UI33 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.99□□□□□ -1.93
SCN11AQ9UI33 RN7SL499P-201ENST00000481141 276 ntBASIC2.99□□□□□ -1.93
SCN11AQ9UI33 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.99□□□□□ -1.93
SCN11AQ9UI33 RPL23AP49-201ENST00000492925 468 ntBASIC2.99□□□□□ -1.93
SCN11AQ9UI33 AL024509.2-201ENST00000493462 493 ntBASIC2.99□□□□□ -1.93
SCN11AQ9UI33 RPS27P27-201ENST00000498779 255 ntBASIC2.99□□□□□ -1.93
SCN11AQ9UI33 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.99□□□□□ -1.93
SCN11AQ9UI33 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.99□□□□□ -1.93
SCN11AQ9UI33 AC110994.2-201ENST00000635481 492 ntBASIC2.99□□□□□ -1.93
SCN11AQ9UI33 MTND5P23-201ENST00000430812 1655 ntBASIC2.99□□□□□ -1.93
SCN11AQ9UI33 AC117529.2-201ENST00000512159 2068 ntBASIC2.98□□□□□ -1.93
SCN11AQ9UI33 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
SCN11AQ9UI33 FRG1BP-201ENST00000278882 761 ntBASIC2.98□□□□□ -1.93
SCN11AQ9UI33 Y_RNA.140-201ENST00000363474 103 ntBASIC2.98□□□□□ -1.93
SCN11AQ9UI33 RNU6-253P-201ENST00000384730 105 ntBASIC2.98□□□□□ -1.93
SCN11AQ9UI33 MORF4L1P6-201ENST00000418771 268 ntBASIC2.98□□□□□ -1.93
SCN11AQ9UI33 PTP4A1P1-201ENST00000420539 515 ntBASIC2.98□□□□□ -1.93
SCN11AQ9UI33 GSTA11P-201ENST00000452866 669 ntBASIC2.98□□□□□ -1.93
SCN11AQ9UI33 AC106872.3-201ENST00000495104 446 ntBASIC2.98□□□□□ -1.93
SCN11AQ9UI33 XKRY-201ENST00000510392 1100 ntBASIC2.98□□□□□ -1.93
SCN11AQ9UI33 MTCYBP20-201ENST00000524239 1129 ntBASIC2.98□□□□□ -1.93
SCN11AQ9UI33 RANP3-201ENST00000530970 276 ntBASIC2.98□□□□□ -1.93
SCN11AQ9UI33 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SCN11AQ9UI33 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.98□□□□□ -1.93
SCN11AQ9UI33 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SCN11AQ9UI33 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.98□□□□□ -1.93
SCN11AQ9UI33 AC107294.3-201ENST00000609211 526 ntBASIC2.98□□□□□ -1.93
SCN11AQ9UI33 AC002076.2-201ENST00000617362 122 ntBASIC2.98□□□□□ -1.93
SCN11AQ9UI33 MIR6873-201ENST00000622788 63 ntBASIC2.98□□□□□ -1.93
SCN11AQ9UI33 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SCN11AQ9UI33 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SCN11AQ9UI33 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.98□□□□□ -1.93
SCN11AQ9UI33 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
SCN11AQ9UI33 RPL21P132-201ENST00000331267 462 ntBASIC2.97□□□□□ -1.93
SCN11AQ9UI33 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SCN11AQ9UI33 Y_RNA.595-201ENST00000410403 105 ntBASIC2.97□□□□□ -1.93
SCN11AQ9UI33 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.97□□□□□ -1.93
SCN11AQ9UI33 MUPP-201ENST00000438111 566 ntBASIC2.97□□□□□ -1.93
SCN11AQ9UI33 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.97□□□□□ -1.93
SCN11AQ9UI33 RN7SKP210-201ENST00000459176 261 ntBASIC2.97□□□□□ -1.93
SCN11AQ9UI33 AL049830.2-201ENST00000480072 201 ntBASIC2.97□□□□□ -1.93
SCN11AQ9UI33 AC108860.1-201ENST00000484521 383 ntBASIC2.97□□□□□ -1.93
SCN11AQ9UI33 AC104090.1-201ENST00000506341 1171 ntBASIC2.97□□□□□ -1.93
SCN11AQ9UI33 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.97□□□□□ -1.93
SCN11AQ9UI33 NF1P10-201ENST00000613227 742 ntBASIC2.97□□□□□ -1.93
SCN11AQ9UI33 U6.98-201ENST00000637157 84 ntBASIC2.97□□□□□ -1.93
SCN11AQ9UI33 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SCN11AQ9UI33 ADAM3A-203ENST00000461344 2157 ntBASIC2.97□□□□□ -1.93
SCN11AQ9UI33 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.97□□□□□ -1.93
SCN11AQ9UI33 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.97□□□□□ -1.93
SCN11AQ9UI33 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SCN11AQ9UI33 AL023284.1-201ENST00000403956 276 ntBASIC2.97□□□□□ -1.93
SCN11AQ9UI33 RPL36AP6-201ENST00000435770 321 ntBASIC2.97□□□□□ -1.93
SCN11AQ9UI33 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.97□□□□□ -1.93
SCN11AQ9UI33 RPL36AP21-201ENST00000490372 323 ntBASIC2.97□□□□□ -1.93
SCN11AQ9UI33 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.97□□□□□ -1.93
SCN11AQ9UI33 CD24P2-201ENST00000565486 219 ntBASIC2.97□□□□□ -1.93
SCN11AQ9UI33 AC006116.7-201ENST00000590141 756 ntBASIC2.97□□□□□ -1.93
SCN11AQ9UI33 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
SCN11AQ9UI33 RN7SKP123-201ENST00000410732 291 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms