Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 DUXAP8-207ENST00000456786 622 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 RPL23AP44-201ENST00000482216 473 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 ACTG1P13-201ENST00000486987 1043 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 RN7SL504P-201ENST00000494496 287 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 MTND4LP22-201ENST00000508209 276 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AC109471.1-201ENST00000511631 612 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 PHBP14-201ENST00000512887 367 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AC110760.3-202ENST00000515177 371 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 SNORA70.19-201ENST00000516717 90 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AC023632.1-201ENST00000518463 375 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 OR10V3P-201ENST00000525712 725 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 OR8L1P-201ENST00000534005 955 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AC011816.2-201ENST00000607089 556 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AP004247.3-201ENST00000608682 624 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AP005137.2-201ENST00000609238 400 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AC009237.15-201ENST00000610252 501 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 DUXAP10-204ENST00000612052 616 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 RNU6-156P-201ENST00000621869 107 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 ZNF833P-201ENST00000424938 1494 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AL672296.1-201ENST00000427780 2158 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 SNORA48.2-201ENST00000390926 124 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 MTCO1P56-201ENST00000401674 224 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 MTCO2P31-201ENST00000402702 684 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AL357075.1-201ENST00000404107 726 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 HMGN1P24-201ENST00000412282 298 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 RPL30P2-201ENST00000414021 291 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 RAC1P8-201ENST00000427086 527 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 MTCYBP32-201ENST00000427945 1084 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AL158071.1-201ENST00000430315 461 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AL358794.1-201ENST00000445689 381 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 Z75741.1-201ENST00000446793 314 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AC097262.1-201ENST00000452559 548 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 RPL23AP67-201ENST00000465341 474 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AC012181.1-201ENST00000479895 423 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AC011352.3-201ENST00000505162 593 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AC021678.1-201ENST00000505195 936 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AC118282.2-201ENST00000508739 374 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 MIR4760-201ENST00000585040 80 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 VN1R92P-201ENST00000598511 928 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AC073657.2-201ENST00000605661 303 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 RNU4-5P-201ENST00000607255 135 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AC006023.2-201ENST00000609916 167 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AC123767.1-202ENST00000620407 817 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 AL513302.2-201ENST00000562313 1842 ntBASIC3.28□□□□□ -1.88
APOBEC3BQ9UH17 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.27□□□□□ -1.89
APOBEC3BQ9UH17 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.27□□□□□ -1.89
APOBEC3BQ9UH17 GNG5P1-201ENST00000255500 204 ntBASIC3.27□□□□□ -1.89
APOBEC3BQ9UH17 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBEC3BQ9UH17 RNA5SP374-201ENST00000362939 125 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms