Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 AC068657.1-201ENST00000520807 306 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 MIR4504-201ENST00000577413 92 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 BPTFP1-201ENST00000579209 492 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 BNIP3P40-201ENST00000596017 556 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 AL365400.2-201ENST00000605604 902 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 AC073657.2-201ENST00000605661 303 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 AC120053.1-201ENST00000607706 736 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 uc_338.1-201ENST00000612113 180 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 AC116096.1-201ENST00000566804 2314 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
CLIP2Q9UDT6 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 AC017071.1-201ENST00000564407 2204 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 RNU6-335P-201ENST00000364563 113 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 AL355143.1-201ENST00000407101 841 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 AL354692.1-201ENST00000423044 315 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 RPL36P19-201ENST00000430744 301 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 AC010881.1-201ENST00000433830 235 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 NF1P3-201ENST00000457709 450 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 AL163153.1-201ENST00000554223 283 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 OR4T1P-201ENST00000554933 911 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 GTF2IP8-201ENST00000560687 584 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 MIR4789-201ENST00000577469 82 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 MIR5004-201ENST00000579078 107 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 MTATP6P2-201ENST00000603319 678 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 AC007566.2-201ENST00000603642 413 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 AC005000.2-201ENST00000605468 310 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 AC105227.2-201ENST00000615075 605 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 AC078880.5-201ENST00000617845 421 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 AC026422.1-201ENST00000623961 452 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 AC097520.1-201ENST00000624435 385 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 AC068620.4-201ENST00000636730 1182 ntBASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLIP2Q9UDT6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 MTND5P27-201ENST00000428871 1720 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 SGO1P1-201ENST00000603525 1447 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 RNU6-600P-201ENST00000362524 99 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 RNU6-444P-201ENST00000383988 108 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 RNU6-207P-201ENST00000384137 107 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 RNU6-549P-201ENST00000384433 107 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 MIR16-1-201ENST00000385271 89 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 RNU4-47P-201ENST00000410876 114 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 FTH1P1-201ENST00000437933 532 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 AC127537.2-201ENST00000439258 465 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 RPS17P11-201ENST00000474297 293 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 AC092185.1-201ENST00000491371 97 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 AC114322.1-201ENST00000506771 926 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 HMGB3P15-201ENST00000507326 574 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 MTCYBP41-201ENST00000528913 1123 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 TRAV37-201ENST00000553906 342 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 AC022069.1-201ENST00000582910 658 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 IGHV3-29-201ENST00000604817 344 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 AC008759.3-201ENST00000613300 508 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 AC022306.3-201ENST00000619930 550 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 AL590396.4-201ENST00000636779 956 ntBASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.82□□□□□ -1.8
CLIP2Q9UDT6 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 AL079305.1-201ENST00000623159 3008 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 AL353746.1-201ENST00000566293 6881 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms