Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.51□□□□□ -1.69
DKK3Q9UBP4 AC022878.1-201ENST00000530684 149 ntBASIC4.51□□□□□ -1.69
DKK3Q9UBP4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.51□□□□□ -1.69
DKK3Q9UBP4 HSPE1P3-201ENST00000559254 309 ntBASIC4.51□□□□□ -1.69
DKK3Q9UBP4 MIR5697-201ENST00000578045 78 ntBASIC4.51□□□□□ -1.69
DKK3Q9UBP4 AP001180.3-201ENST00000582221 145 ntBASIC4.51□□□□□ -1.69
DKK3Q9UBP4 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.51□□□□□ -1.69
DKK3Q9UBP4 SNORD39.3-201ENST00000584451 71 ntBASIC4.51□□□□□ -1.69
DKK3Q9UBP4 AC093227.2-201ENST00000589357 285 ntBASIC4.51□□□□□ -1.69
DKK3Q9UBP4 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.51□□□□□ -1.69
DKK3Q9UBP4 BNIP3P8-201ENST00000597863 560 ntBASIC4.51□□□□□ -1.69
DKK3Q9UBP4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.51□□□□□ -1.69
DKK3Q9UBP4 AL139395.1-201ENST00000603662 160 ntBASIC4.51□□□□□ -1.69
DKK3Q9UBP4 AC090578.1-201ENST00000604955 591 ntBASIC4.51□□□□□ -1.69
DKK3Q9UBP4 AC008966.2-201ENST00000606157 453 ntBASIC4.51□□□□□ -1.69
DKK3Q9UBP4 AC091979.2-201ENST00000607514 214 ntBASIC4.51□□□□□ -1.69
DKK3Q9UBP4 AL357078.3-201ENST00000607528 618 ntBASIC4.51□□□□□ -1.69
DKK3Q9UBP4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.51□□□□□ -1.69
DKK3Q9UBP4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.51□□□□□ -1.69
DKK3Q9UBP4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.51□□□□□ -1.69
DKK3Q9UBP4 AL161637.1-201ENST00000622380 412 ntBASIC4.51□□□□□ -1.69
DKK3Q9UBP4 AC008785.1-201ENST00000624475 456 ntBASIC4.51□□□□□ -1.69
DKK3Q9UBP4 OR5H6-203ENST00000642105 978 ntBASIC4.51□□□□□ -1.69
DKK3Q9UBP4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
DKK3Q9UBP4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.51□□□□□ -1.69
DKK3Q9UBP4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AC097504.1-201ENST00000515103 2415 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 MIR1305-201ENST00000408300 86 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 RN7SKP266-201ENST00000410232 287 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 PRELID3BP11-201ENST00000414230 479 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 RPL7P30-201ENST00000420888 709 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AL592293.2-201ENST00000422292 996 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 RPL23AP24-201ENST00000458203 385 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AC034236.1-201ENST00000469891 373 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AC010301.1-201ENST00000473936 355 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 RPL9P6-201ENST00000492764 598 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AL592156.1-201ENST00000508758 304 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 KCTD9P2-201ENST00000512203 1013 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AL109766.1-201ENST00000555080 552 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AC092325.1-201ENST00000566449 554 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AC068135.2-201ENST00000569293 1028 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 MIR4307-201ENST00000582802 84 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AC097468.3-201ENST00000607956 456 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AC020634.1-201ENST00000608701 549 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AC103710.1-201ENST00000610003 901 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AL359535.1-201ENST00000612100 1087 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AP001506.1-201ENST00000615444 211 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 MIR6891-201ENST00000618788 93 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 EXOC5P1-201ENST00000510543 1969 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AC006378.2-201ENST00000623178 2476 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 AC025031.4-201ENST00000621248 3271 ntBASIC4.5□□□□□ -1.69
DKK3Q9UBP4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.5□□□□□ -1.69
DKK3Q9UBP4 SAGE2P-201ENST00000420011 2126 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.49□□□□□ -1.69
DKK3Q9UBP4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
DKK3Q9UBP4 AC139769.1-204ENST00000472297 1931 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DKK3Q9UBP4 OR5P1P-201ENST00000299512 925 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.49□□□□□ -1.69
DKK3Q9UBP4 RNU1-130P-201ENST00000363930 160 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 RNU1-64P-201ENST00000365443 163 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 RNY3P14-201ENST00000384309 102 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 MIR3065-201ENST00000390137 79 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 U8.14-201ENST00000390843 143 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 SNRPEP2-201ENST00000397592 279 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 BTF3P7-201ENST00000407097 488 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 SNORA11F-201ENST00000408237 128 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.49□□□□□ -1.69
DKK3Q9UBP4 RPL30P16-201ENST00000419341 429 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.49□□□□□ -1.69
DKK3Q9UBP4 AL451062.2-201ENST00000427515 271 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms