Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 FAM157B-203ENST00000639350 358 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 ELL2P4-201ENST00000446870 1376 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 MAPK10-372ENST00000641954 3413 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 AC087359.1-201ENST00000508335 1740 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 SKINT1L-201ENST00000401057 817 ntBASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 MTCYBP38-201ENST00000417160 1123 ntBASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 SYF2P2-201ENST00000417620 583 ntBASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AC008065.1-201ENST00000428525 348 ntBASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AL590103.1-201ENST00000434488 307 ntBASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AC092427.1-201ENST00000439177 601 ntBASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 SYPL1P1-201ENST00000473622 768 ntBASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AC087369.1-201ENST00000520775 996 ntBASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AL356057.1-201ENST00000533798 831 ntBASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AC007954.1-201ENST00000554198 494 ntBASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 GNRHR2P1-201ENST00000555315 631 ntBASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AGGF1P8-201ENST00000562979 1000 ntBASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AC022968.1-201ENST00000567372 442 ntBASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AC083899.3-201ENST00000603413 594 ntBASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AL159169.3-201ENST00000608871 561 ntBASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 AC011477.1-204ENST00000623416 1325 ntBASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 HSPA8P1-201ENST00000425843 1833 ntBASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HDAC6Q9UBN7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HDAC6Q9UBN7 AL136964.1-201ENST00000622038 2990 ntBASIC4.34□□□□□ -1.72
HDAC6Q9UBN7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HDAC6Q9UBN7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 DDX43P2-201ENST00000604753 1354 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 SNRPEP3-201ENST00000338402 276 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 RNU6-1243P-201ENST00000364028 107 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 RNU6-553P-201ENST00000364047 96 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 SNORD3H-201ENST00000384486 214 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AL450338.1-201ENST00000407987 512 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AC068533.1-201ENST00000418542 415 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AL139247.1-201ENST00000422768 325 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AC097262.1-201ENST00000452559 548 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 RN7SL271P-201ENST00000487601 295 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AC108078.3-201ENST00000502633 489 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AC006499.5-201ENST00000505037 514 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 BTF3L4P4-201ENST00000506381 449 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 MTATP6P22-201ENST00000507369 598 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AC090071.1-201ENST00000507713 644 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AC026726.1-201ENST00000512859 601 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AC007991.1-201ENST00000522680 631 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AC239860.2-201ENST00000525886 270 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AC008127.2-201ENST00000549925 1075 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AC012468.1-201ENST00000604888 430 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 HSPE1P14-201ENST00000605812 302 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 AC243773.3-201ENST00000613270 256 ntBASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HDAC6Q9UBN7 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HDAC6Q9UBN7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HDAC6Q9UBN7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HDAC6Q9UBN7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.32□□□□□ -1.72
HDAC6Q9UBN7 AL139811.1-201ENST00000424779 2299 ntBASIC4.32□□□□□ -1.72
HDAC6Q9UBN7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HDAC6Q9UBN7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms